Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1709 ATGGCAGCTACTCTTAAAAACTGTGCAATCTTCTACACACTAATATACCTGTGTGGGTTTCTGAGCTTGGAAACCCTATCTGCTCCAACCTACCTTGGTTATTACTGCACAGAAAATGGCACCTACACTTCTAATAGCAGCTTTCGTGGCAATCTCAATGCTCTTCTTAATTCCCTCGTCACCAACACCACTCAGGCGAAGGGATATTACACCGTCATGGGCTACGGAACAGCCAATCAGATAGATCCGGTCAACGGACTTTTCAACTGCCGGCTAGACCTCAACACCAGCAGTTGTCAACAGTGTATCAACGCCGCGGGCACAGAGATCATGCAGCGTTGCCCTAACCAGACGGAGGCCATCATCTGGTATGAAGAGTGCATGCTGCGTTACACAGGAAGGTTCTTCAGGTATTACAGTATCGTTCCCGGGAGGAACATGGTCGACGGGAAGAACATCTCCGGCAACGACTTGAACGAGTTCAATCAAACGTTGTTCAGCTTGTTGAACGATATAGCAGTCCAAACAGCGAATTCTCAGACACCGATTAAGTTCACCACCGGGGAAGCAAGGTTTGGCGGCAACCAGACTCTGTATGGGATGGGGCAGTGCACGACGGATATACAGTCGGCTCAGTGTGAGACTTGCTTGAAAAACGCCATCGGGACTTTTCCGACGTGTTGTAACGGGGCCGGAGGGGCCAGAGCTCTGCTTGCGTCATGTGTTATCCGATATGAATTGTATCCATTTTACAATTCATCCAGTTCCTTGTCGAATTCTTCAGGGAAGAAGAAGCTTTCATCAGTAGCAGTTATCTTGATTGTTGTCCTTGTTGGGGCTTCAGTAGTTCTGTTGGGTTTTGTCAGCTTTTTGCTGCGGCGAAGAGCAAGCCAAAAGCAGAGGAATATTCTACAGGAAAATTTTGGGGAAGAACTGGCTACTTTGGAGTCCTTGCAATTCAGCTTGGCCACAATTGAAGCTGCCACAAACAGGTTTTCACATGAGAAAAAAATTGGCAGAGGTGGTTTTGGAGAAGTTTACAAGGGAACTCTTCAGGATGGGCGAGAAATAGCTGTTAAAAAGCTTTCAAGAAGTTCTGGGCAAGGTGCTATAGAGTTTAAAACTGAAATCTTGCTAATTGCCAAGTTGCAGCACAGGAATTTGGTGGCTTTATTAGGATTTTGCCTGGAAGAACAAGAGAAAATACTCATTTATGAATATGTACCCAATAAAAGTCTCGACCACTTTCTATTTGATCCCAAAAAGGAGAAAGTACTGAATTGGTATGAACGTTATAAGATCATTGGAGGCATTGCACAAGGAATTCATTATTTACATGAGCATTCTCGGCTCAAAATTATACATCGTGACCTTAAACCAAGCAATGTATTATTAGATGACAACATGAATCCAAAAATTTCAGACTTTGGCATGGCAAGAATCATTGCTATAGATCAAGATCAAATTATTACTAATAGAATTGTTGGTACATATGGTTATATGTCTCCAGAATATGCAATGCATGGCCAATTTTCTGAAAAGTCTGATGTATTCAGTTTTGGTGTAATAGTTCTTGAGATAGTTACTGCAAGAAGGAATGCTCGTCCTATTGAAACTCAAGATCTTGATGACCTCGTAAGTCAGGCTTGGAAACATTGGAGGAATCAGACACCGCTTGAGATAGTGGACCCAGAAATAAAAGATTCATTTTCTCAGAGTGAAGTGATCAAATGCATCCAAATAGGTCTATTATGCGTCCACGAGAACCCAGAAAATAGACCCACAATGGCAAGGATTGTTTCATATCTAAGTAGCCTTTTAGCCGAATTGCCATTGCCTCAAGAACCAGCATTTCACACGGATACTGACTTGAATCTGAACTTGGTATCATGGGAATCCAGTACAGCTCAATCTACCTATACTTCTATGACATCCTCAAATCATGAAATGTATAAGAGTAATAATTTTCCAAGATAG 1977 0.4259 MAATLKNCAIFYTLIYLCGFLSLETLSAPTYLGYYCTENGTYTSNSSFRGNLNALLNSLVTNTTQAKGYYTVMGYGTANQIDPVNGLFNCRLDLNTSSCQQCINAAGTEIMQRCPNQTEAIIWYEECMLRYTGRFFRYYSIVPGRNMVDGKNISGNDLNEFNQTLFSLLNDIAVQTANSQTPIKFTTGEARFGGNQTLYGMGQCTTDIQSAQCETCLKNAIGTFPTCCNGAGGARALLASCVIRYELYPFYNSSSSLSNSSGKKKLSSVAVILIVVLVGASVVLLGFVSFLLRRRASQKQRNILQENFGEELATLESLQFSLATIEAATNRFSHEKKIGRGGFGEVYKGTLQDGREIAVKKLSRSSGQGAIEFKTEILLIAKLQHRNLVALLGFCLEEQEKILIYEYVPNKSLDHFLFDPKKEKVLNWYERYKIIGGIAQGIHYLHEHSRLKIIHRDLKPSNVLLDDNMNPKISDFGMARIIAIDQDQIITNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIVLEIVTARRNARPIETQDLDDLVSQAWKHWRNQTPLEIVDPEIKDSFSQSEVIKCIQIGLLCVHENPENRPTMARIVSYLSSLLAELPLPQEPAFHTDTDLNLNLVSWESSTAQSTYTSMTSSNHEMYKSNNFPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1709 658 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Acco01g1709 658 FunFam Cysteine-rich receptor-like protein kinase 10 145 250 - -
Acco01g1709 658 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Acco01g1709 658 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
Acco01g1709 658 Gene3D Transferase(Phosphotransferase) domain 1 408 614 - -
Acco01g1709 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 293 407 - -
Acco01g1709 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 654 - -
Acco01g1709 658 Gene3D - 29 136 IPR038408 -
Acco01g1709 658 Gene3D - 145 250 IPR038408 -
Acco01g1709 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 136 - -
Acco01g1709 658 Pfam Protein kinase domain 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1709 658 CDD STKc_IRAK 338 606 - -
Acco01g1709 658 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1709 658 FunFam cysteine-rich receptor-like protein kinase 10 408 610 - -
Acco01g1709 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Acco01g1709 658 SUPERFAMILY Protein kinase-like (PK-like) 317 643 IPR011009 -
Acco01g1709 658 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Acco01g1709 658 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Acco01g1709 658 SMART serkin_6 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1709 658 Gene3D Phosphorylase Kinase; domain 1 293 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1709 Acco-ChrAcco01 31179687 31183536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1709 20 618 Receptor kinase-like Gene Family AT4G05200 47.011 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1709 Pkinase 7e-51 CL0016