Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1704 ATGGAAGAATGGCCGAGATATCAGATCAAGATTCCGTTAGGCGACCCTGTGCTTTTAAGAAACCGTCGTTTTTACGATACGTTGGGATCTATTTTGAATGATCTGGTAGATGGAGCAGCTGAGGCTCTTGGGAAATCTGATTCCAAGTACGGTGTACAGAAAGGTGACGCGTCGGATAACACGACGCTGTACGGATTGGCTCAGTGCACGCCGGACTTAGCCACCGGCGACTGCAGGCAGTGTGTCCGGGATGCGATGGAGGAGATTACGACATCGTGTTGCGGAGGTAGCATTGGACAAAGTGTAATGTTTCCCAGTTGCTTTGTTCGCTATGAAACTTATCCGTTTTATCAACATTCCGGAACGTCGACACCCTCGCCGACGGGGGCTAACGGGAAAAACAACAAATTGAAGACGCAAATTATTGCAATTATTGTCCCCTCGATTATTGTTCTGGTGGCGATACTCGTTTTGTGCCATTACATGGTACCCACAGCCACAAATTCAAATTCAAAGAAGAAATCACAAAGAGCCATTGATCTCTCGGAAAACTTCGGCGTTGAAATTATTACCACAATGGATTCCTTGCAAATTGACATGGCTACAATTAAAGTAGCTACGAACAATTTTTCTGAAAGAAGCTGGATTGGCAAAGGTGGATTTGGAAAAGTTTACAAGGGAGTTCTTTGTAATGGACAAGAGATAGCTATAAAGAGATTGTCAAGAACTTCTTCACAAGGAGTTGAAGAATTTAAAAATGAGGTTTTGCTGATAGCCAAACTTCAACATAGAAATTTAGTGAGGCTACTTGGATTCTGTCTTGAAGATGATGAGAAGATACTTGTCTATGAATATGTGCCTAACAAAAGCCTTAATCACTTTCTATTTGATCCTTTAAAGCAAAGGGAATTAACTTGGGCTGAGCGGTTTGAGATTATAAGAGGAATTGCTCGAGGAATCCTATATTTGCATGAAGACTCTCGTCTAAAGATTATACATCGTGATTTGAAACCAAGCAATATTTTGTTAGATAGAAACATGAATCCAAAAATCTCAGATTTTGGTATGGCAAGACTAATAACATTGGACCAGATTGAAGGAAGCACAACTAGGATTGTTGGAACATATGGTTATATATCTCCAGAGTATGCTATGCATGGATATTTTTCTACAAAATCCGACGTCTTTAGTTTTGGAGTTATGATGCTTGAGATTATCAGTGGAAGAAAGAATTCTTGTTCATATGATTCATGCCGCATTGATGATCTCTTGAGCTATGCTTGGAGAAAATGGAGGGAAGAATCAATAGAAGAATTGATGGATGCGGCAGTGAAAGAATCATATTCTCAACAAGAAGTGTTTAGGTGCATTCAAATTGGTTTATTGTGCGTTCAAGAAAATCCAGATGATAGGCCTACAATGGGAAACATTGCTTCATATCTAAGCAACGTTGCAGTTGAATTACCATATCCTCTAGAACCTGCATTTTTCATGCAAGGTAGAAGAAGACGATACAATGTTGAACATGGTCCTAATCTTGATCACTCCACCAACTACTCTGTCTCCTCATCCATTAATGAGATGTCTATCAGCAAATTTTTCCCTCGCTAA 1611 0.4004 MEEWPRYQIKIPLGDPVLLRNRRFYDTLGSILNDLVDGAAEALGKSDSKYGVQKGDASDNTTLYGLAQCTPDLATGDCRQCVRDAMEEITTSCCGGSIGQSVMFPSCFVRYETYPFYQHSGTSTPSPTGANGKNNKLKTQIIAIIVPSIIVLVAILVLCHYMVPTATNSNSKKKSQRAIDLSENFGVEIITTMDSLQIDMATIKVATNNFSERSWIGKGGFGKVYKGVLCNGQEIAIKRLSRTSSQGVEEFKNEVLLIAKLQHRNLVRLLGFCLEDDEKILVYEYVPNKSLNHFLFDPLKQRELTWAERFEIIRGIARGILYLHEDSRLKIIHRDLKPSNILLDRNMNPKISDFGMARLITLDQIEGSTTRIVGTYGYISPEYAMHGYFSTKSDVFSFGVMMLEIISGRKNSCSYDSCRIDDLLSYAWRKWREESIEELMDAAVKESYSQQEVFRCIQIGLLCVQENPDDRPTMGNIASYLSNVAVELPYPLEPAFFMQGRRRRYNVEHGPNLDHSTNYSVSSSINEMSISKFFPR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1704 536 ProSiteProfiles Protein kinase domain profile. 210 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1704 536 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 52 531 - -
Acco01g1704 536 SMART serkin_6 210 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1704 536 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 171 285 - -
Acco01g1704 536 Gene3D - 18 116 IPR038408 -
Acco01g1704 536 ProSiteProfiles Gnk2-homologous domain profile. 6 116 IPR002902 -
Acco01g1704 536 CDD STKc_IRAK 216 481 - -
Acco01g1704 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Acco01g1704 536 Pfam Protein tyrosine and serine/threonine kinase 215 480 IPR001245 GO:0004672|GO:0006468
Acco01g1704 536 Gene3D Phosphorylase Kinase; domain 1 168 285 - -
Acco01g1704 536 Gene3D Transferase(Phosphotransferase) domain 1 286 488 - -
Acco01g1704 536 SUPERFAMILY Protein kinase-like (PK-like) 197 506 IPR011009 -
Acco01g1704 536 Pfam Salt stress response/antifungal 21 114 IPR002902 -
Acco01g1704 536 FunFam cysteine-rich receptor-like protein kinase 10 286 488 - -
Acco01g1704 536 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1704 Acco-ChrAcco01 31070737 31073809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1704 23 536 Receptor kinase-like Gene Family AT4G05200 46.604 3.09e-159 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1704 PK_Tyr_Ser-Thr 2.9e-48 CL0016