Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1696 ATGCCTTTACTTTATTTGCCTTTGCTCGCTTTCTTTTCTCATCACTTTCTTATTCTCACGGCCCAGCCAGATTTCCGAGCGCAGGATTGTTACCCAGAAAGAGGTAATAACTACACAGACAAAAGTACCTACCAAACCAACCTCAAGGCCCTTCTTTCTGATTTCACTTCGGACGACACAAACATTGAATATGGCTATATCAATTCCTCTTATGGCCAAAACCCTGACACAGTTCACGCACTTGGATTCTGCAGAGGCGATGTGAAGCCTGATTCTTGCCGTACTTCTAATTCAACCACACTCACGGATCAATACGCACAGGTACTATTGGATAAGGTAGAGAAGCAAGCACCAACAGGAGGCTCTCATCGTAAGTTTGCAGCAGCCAATGATACTACAAGCCAATCTGGGAATGTGTATGCTTTTGCTCAGTGCAGTCCGGATCTGTCTGAGGATGGTTGCAGATATGAGAGCGGCCTCTTCTATGATTATACCGCCGTTTCAGCCCAGCCATCTCCTCCGCCGTCCACCACCGTGATGCCACCGCCACCCCAAGTTGGAGAAGATGGTTCAAATCTGAGGTCCTTGCAACTTAGCTTTGCTACAGTTGAAGCTGCAACAAATAAGTTTGCTGTGGAGAACAAAATAGGCAAAGGAGGATTTGGAGAAGTTTATAAGGGAACTCTTCCTGGTGGACGAGAAATTGCTGTGAAGAGACTTTCAAAAAGTTCAGTGCAAGGAACATTAGAGTTCAAGAATGAAATTTTGCTTATAGCCAAACTCCAGCATAGAAATTTAGTAACATTATTAGGATTTTGCTTGGAAGAACAGGATAAAATTCTTATTTACGAATATGTGCCTAACAAGAGCATTGATTTCTTCTTATTTGATCCAGAAACACAAAGATTACTCAACTGGTCAGAGCGATTCAAAATCATTGGAGGAATTGCACAGGGGCTTTCTTATCTACATGAACATTCCCGTTTAAAAGTTATCCATCGTGATCTCAAACCAAACAATATTTTATTAGATGATAAGATGAATCCAAAAATAGCAGATTTTGGTATAGCAAGAATGATCTCTATAGATGAAGACCAAGGAAATACAAATAGAATTGTCGGAACATATGGTTATATGGCTCCTGAATATATAATGAATGGACAATTTTCTGAAAAATCTGATATATTTAGTTATGGAGTTATAGTTTTAGAAGTGATTAGTGGGAAGAGGAATGCTGCTAGATCCTATCAATCATACCTCTTAACCGATGTGTGGAAGCAGTGGAATGTTGGTACACCATTACAAATATTGGACCCTTTTCTAATGGAATCTTGTTCTCAAACTGAAGTGAGGAAGTGTGTGCAAATTGGGTTATTGTCCGTTCAACAAAATCCAGAAGAGAGGCCAACAATGGCTCAAATTGTTTCATATCTCAGTAATCTTTCTATGGACTTGCCATCTCCAAGAGAGCCCGCTTTCTTCATACATTCCAGTCCAACTATGTTAGCAGATTTGAGTTTGGATAAAACTCATCAGAGTTCAATTTCCAAGTCAGCCAGTTCAAATGAAGCGTCACGCCTTTTGACTCGATGA 1593 0.4043 MPLLYLPLLAFFSHHFLILTAQPDFRAQDCYPERGNNYTDKSTYQTNLKALLSDFTSDDTNIEYGYINSSYGQNPDTVHALGFCRGDVKPDSCRTSNSTTLTDQYAQVLLDKVEKQAPTGGSHRKFAAANDTTSQSGNVYAFAQCSPDLSEDGCRYESGLFYDYTAVSAQPSPPPSTTVMPPPPQVGEDGSNLRSLQLSFATVEAATNKFAVENKIGKGGFGEVYKGTLPGGREIAVKRLSKSSVQGTLEFKNEILLIAKLQHRNLVTLLGFCLEEQDKILIYEYVPNKSIDFFLFDPETQRLLNWSERFKIIGGIAQGLSYLHEHSRLKVIHRDLKPNNILLDDKMNPKIADFGIARMISIDEDQGNTNRIVGTYGYMAPEYIMNGQFSEKSDIFSYGVIVLEVISGKRNAARSYQSYLLTDVWKQWNVGTPLQILDPFLMESCSQTEVRKCVQIGLLSVQQNPEERPTMAQIVSYLSNLSMDLPSPREPAFFIHSSPTMLADLSLDKTHQSSISKSASSNEASRLLTR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1696 530 FunFam cysteine-rich receptor-like protein kinase 10 286 485 - -
Acco01g1696 530 Gene3D Phosphorylase Kinase; domain 1 187 285 - -
Acco01g1696 530 Gene3D - 100 156 IPR038408 -
Acco01g1696 530 Gene3D - 25 99 IPR038408 -
Acco01g1696 530 ProSiteProfiles Protein kinase domain profile. 210 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1696 530 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Acco01g1696 530 Pfam Protein kinase domain 211 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1696 530 Gene3D Transferase(Phosphotransferase) domain 1 286 487 - -
Acco01g1696 530 Pfam Salt stress response/antifungal 30 96 IPR002902 -
Acco01g1696 530 CDD STKc_IRAK 216 481 - -
Acco01g1696 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Acco01g1696 530 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 189 524 - -
Acco01g1696 530 SUPERFAMILY Protein kinase-like (PK-like) 195 512 IPR011009 -
Acco01g1696 530 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Acco01g1696 530 SMART serkin_6 210 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1696 530 FunFam Cysteine-rich receptor-like protein kinase 10 180 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1696 Acco-ChrAcco01 31000765 31003852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1696 38 497 Receptor kinase-like Gene Family AT4G23230 38.345 1.29e-133 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1696 Pkinase 2.5e-50 CL0016