Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1694 ATGTTTTTCTTCATCATTTCCATCTTATTTCTTCACCATGTCTCAGGTTCAGATCCTATCTTCACTTGGTGTTCTCCTGAATTCCAAGATCACTCACTGAACTCTACATTTCATAACAACCTTGAGCTTCTTCTGGGGTCACTTTCCAGCAACATTTCAGCCTCAGGTTTCTATAACACATCCACTGGAGAAGACCCAGAAAAGGTGTATGGACTTGCACTATGCAGAGGAGACATAAATTCAACAATTTGTAAGGATTGTGTTGAGAAAGCAAGCCAAGATATACTCAACAAATGTAAGAGTCAAGATGCTATGATATGGTATGATCTTTGTCAAGTAAGATACTCCTTTCAGATGTTCATTTCAAGGATGGTTTATACTGGTAAGTATCCAGACGAAAATAACCAGGCGAAGAACGTGACGGATCCTGCTCGGTTCAGTCAGGTTCTGACATACTTAATGAATAACTTGTCCAATGAGGCTGCCTTTGTTCCTTCCAAGAACATGTTTGCTTCTGGGGAAATTGAATTTTCCCAGAAAATTACAATTTATGGTCTAGTACAATGCACAAGAGACATCTCTGGAACATTATGCTATAACTGTTTGAATTCTGCTCTAGGAGACCTTGGAGCTTGTTGCTCATCCCGAGAAAGTGGGACAGTTCTTAGTCGAACTTGCAATGTCAGGTTTGGATTGTCTCAGTTCTTCAATACTTCTTCTCAGTACCTTGTCGTTTATCCAACTTCTAAAGGAGGGAAATTGAAGATATGGATGCTTGTTCTGATTATATGTGCATCAGTGTTCATATTAGCAGTTCTTACTGGTTTCTGCATTGCCTGTTTCCTTAAAAAGCAAGGGGAAGACAGAGATGATGAAAAAAGCGAAAAGATGCTACTGCAACAATTGGCGACCCCCAAGAGTGTAACAATCACACAAGATGGAGAATTAATTAGCTCTGAAGAACTTGTGTTCATGAGTTTTGCAACAATTAAGTTCGCCACCGATGACTTTTCTGATTCAAACAAGCTTGGACAGGGAGGTTTTGGTTCTGTATACAAAGGTGTTCTTCCGGATGGAAATGAAATAGCAGTCAAAAGGTTATTAAGGAAGTCTTGGCAAGGCATAGAAGAATTCAAAAATGAGGTCATTCTGATTGCAAAACTTCAGCATAAGAATCTTGTGAAGCTGTTGGGATGTGGCTTGGAAGGAGAAGAGCAGTTTCTCATATATGAATACATGTCCAATCAAAGCCTTGACAAATTTATTTTTGATTCAGAAAAACGTTCACAGCTTGATTGGAATACATGCTATGACATTATCAAGGGCATCACTAGAGGATTAATTTATCTTCATGAAGAGTCGAGGCTTAGAATTATTCATAGAGACTTGAAACCAAACAACATATTGCTTGACCATGACATGGTTGCTAAGATATCAGATTTTGGTATGGCAAGAATTTTTTGTGAAAACCAAAGTACTGCTAATACCAAAAGAGTTGTGGGAACATATGGATACATGGCTCCAGAATACGCAATGGGAGGACTGTTCTCAATAAAATCTGATATCTTCAGCTTCGGTGTCATATTGCTTGAGATCATCGGTGGAAAAAGAAGTATTGGCTTTTATGGAACTGAACTTGCCTCTACCCTTCCAGCATATGCTTGGAAGTTATGGAATGAAGGGAAAGCAATGGAATTTGTGGATCCGCATTTAAAGGAAGCATGTATTTCTTCAGAAGTTTTAAGGTGCATGAACATAGGACTGTTATGTGTACAGGAAGACCCAGAAGACAGACCCACCATGTCGGATGTTATGGTTCTGTTAGGAAGTGAATCAATGTCTCTTCCACAACCAAAACAACCTGCATTTTCTGTGGGCAGATCAGTCAAAGTTGATCCATCAATGATGACAACTTCCTCGGTGAATCATATAATGCTCTCTAGCGTTCGACCTAGATGA 1959 0.3925 MFFFIISILFLHHVSGSDPIFTWCSPEFQDHSLNSTFHNNLELLLGSLSSNISASGFYNTSTGEDPEKVYGLALCRGDINSTICKDCVEKASQDILNKCKSQDAMIWYDLCQVRYSFQMFISRMVYTGKYPDENNQAKNVTDPARFSQVLTYLMNNLSNEAAFVPSKNMFASGEIEFSQKITIYGLVQCTRDISGTLCYNCLNSALGDLGACCSSRESGTVLSRTCNVRFGLSQFFNTSSQYLVVYPTSKGGKLKIWMLVLIICASVFILAVLTGFCIACFLKKQGEDRDDEKSEKMLLQQLATPKSVTITQDGELISSEELVFMSFATIKFATDDFSDSNKLGQGGFGSVYKGVLPDGNEIAVKRLLRKSWQGIEEFKNEVILIAKLQHKNLVKLLGCGLEGEEQFLIYEYMSNQSLDKFIFDSEKRSQLDWNTCYDIIKGITRGLIYLHEESRLRIIHRDLKPNNILLDHDMVAKISDFGMARIFCENQSTANTKRVVGTYGYMAPEYAMGGLFSIKSDIFSFGVILLEIIGGKRSIGFYGTELASTLPAYAWKLWNEGKAMEFVDPHLKEACISSEVLRCMNIGLLCVQEDPEDRPTMSDVMVLLGSESMSLPQPKQPAFSVGRSVKVDPSMMTTSSVNHIMLSSVRPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1694 652 Gene3D Phosphorylase Kinase; domain 1 300 412 - -
Acco01g1694 652 Pfam Salt stress response/antifungal 136 231 IPR002902 -
Acco01g1694 652 Pfam Salt stress response/antifungal 29 117 IPR002902 -
Acco01g1694 652 SUPERFAMILY Protein kinase-like (PK-like) 319 607 IPR011009 -
Acco01g1694 652 Pfam Domain of unknown function (DUF3403) 610 652 IPR021820 GO:0004674
Acco01g1694 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Acco01g1694 652 FunFam Uncharacterized protein 413 614 - -
Acco01g1694 652 ProSiteProfiles Protein kinase domain profile. 337 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1694 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 19 120 - -
Acco01g1694 652 SMART serkin_6 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1694 652 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Acco01g1694 652 FunFam Cysteine-rich receptor-like protein kinase 10 132 235 - -
Acco01g1694 652 Gene3D - 129 235 IPR038408 -
Acco01g1694 652 Gene3D - 20 120 IPR038408 -
Acco01g1694 652 ProSiteProfiles Gnk2-homologous domain profile. 19 120 IPR002902 -
Acco01g1694 652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 302 412 - -
Acco01g1694 652 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
Acco01g1694 652 CDD STKc_IRAK 343 604 - -
Acco01g1694 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 631 - -
Acco01g1694 652 Pfam Protein kinase domain 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1694 652 ProSiteProfiles Gnk2-homologous domain profile. 128 235 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1694 Acco-ChrAcco01 30952714 30955470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1694 3 623 Receptor kinase-like Gene Family AT4G05200 42.122 2.88e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1694 Pkinase 5e-47 CL0016