Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1693 ATGGTTGGTTCTTCAAAGCTATTCCTTCTTCTTCTCTGCACCATTTCTTTCTTCTCAGGCGTTTCCTTCGCTGACCCACCCTATCAAAATTGTTCAACAAACAGTAACTACACCAAAGGAAGCTCCTTTCAGAACAACCTTAACAACATCTTCACTTCTCTATCTTCCCACGCTTCAATCTTCAAATCTTACAATGCCTCTTATGGAAAAAACCCAGATACAGTCTATACCCTCTTCATGTGCCTCGACTATGTTTCAAATCAAACATGCCAAGATTGCATAGCCACGGCTTCACAAGACATTCTTAAACTCTGTCCCCAAGCAGAAGAAGCAATAGTTTGGGAAGAACAATGTCAACTTCAATATTCCAGCAAGAACTTCCTCGGAAAAGTGGACGTCACAGGAAAATTGGGGTTTGATAATCAACAGAATATTTCAAAACCAACGGAGTTTGAGTATGAGGTTAATGTGTTATTGAATGGTCTCACTGATAAGGTATCTTCTAATGTTTCTGCTAATTTGTATGCTATTGGAGAGGCACCTTTTGAAGAGAAAACAATATATGGGTTAGTTCAGTGTACAAGAGATTTATCAGCTAGTGATTGTGGTATTTGTCTAAAAAGTGCGATAAGCTATCTACCTGTTTGTTGTTATTCTTCAATTGGAGCTAGAGTTTTAAGCCGTAGCTGCTACTTGAGATTTGAATTATATGCATTTTACAATGGTGAACCTGAACCAAATGTTCCATTTACAACAAGTGGCAAAAGTGCAACAAGCAAAACTGGGATGATTATTGGAATTATAGCAGCGACTGGCTTGGCAACAGCGATTTTGAGTTTCTGCGTTTACTTCCTGAGGAAGAAGAGAACTCAGAAAAGTAAAGGTGGAATATACAGTCACGAGATAGATCTTCATAGATTCGGGCAGAGCGGTGAAACAGTGTTCCAGAATCGCCAGAATTTTGGTGGAAGACCTGACAAGATATCTGAGGATTTGCCTTATTTTGATCTTGAAACTCTGTGTGTTGCTACCAAAAATTTTTCTGATTCAAATAAGCTTGGTCAAGGCGGCTTTGGACCTGTTTACAAGGGTGTATTCAGTGATGGACAGGAAGTAGCAGTCAAGAGGCTTTTAACAGGCTCTGAACAGGGCTCAGAGGAATTCATAAACGAGGTTCTGCTGATTCTGAAACTTCAACACAAAAATCTAGTGAGGCTTCTTGGATTTTGTTTAGATGCAGAAGAAATGCTTCTTGTTTATGAATTTCTGCCTAATGGCAGCCTTGATGCTTTCCTTTTCGATCCAAGGCAGCGTGCACGACTAAGTTGGATCAAACGTGTCGATATAATAGGTGGAATAGCAAGAGGGACTCTTTATCTTCATGAAGATTCTCGATTAAAGATAATTCATAGAGATCTAAAAGCAAGTAATATATTGTTAGATTATGACATGAATCCAAAAATTTCTGATTTTGGAATGGCAAGAATATTTGCCGGAGCTGAAGGTGAAGCTAGCACTGCTACTATAGTTGGTACATATGGATACATGGCTCCAGAATATGCTATGGAGGGATTATATTCCATAAAATCCGATATCTTCAGTTTTGGAGTGTTATTGTTAGAAATTATCACTGGGCGACGCAACGCGGCTTTCTATCACTCTAAAAATGCTCCTAGCCTTCTGGCATATGCGTGGCATCTATGGAATGGGGGAAATGCACTGGAATTGATGGACCCTCTAGTAGCTGATTCCTGCCCTGAAGATCAGTTCCTAGTATACATGCATGTTGGATTACTATGTGTTCAAGAAGATGCATATGACAGACCAACCATGTCTTCTGTTGTTTTAATGTTGAAAAGTCAATCACCAACTCTTGGTCAACCCCAAAGGCCACCCTTCTGTGTGGGAAGAATCATTGATAATGAACAATCCTCAGTCAATAACTTACCAATTTCTGATATACTGCCCCAGTGA 1974 0.3961 MVGSSKLFLLLLCTISFFSGVSFADPPYQNCSTNSNYTKGSSFQNNLNNIFTSLSSHASIFKSYNASYGKNPDTVYTLFMCLDYVSNQTCQDCIATASQDILKLCPQAEEAIVWEEQCQLQYSSKNFLGKVDVTGKLGFDNQQNISKPTEFEYEVNVLLNGLTDKVSSNVSANLYAIGEAPFEEKTIYGLVQCTRDLSASDCGICLKSAISYLPVCCYSSIGARVLSRSCYLRFELYAFYNGEPEPNVPFTTSGKSATSKTGMIIGIIAATGLATAILSFCVYFLRKKRTQKSKGGIYSHEIDLHRFGQSGETVFQNRQNFGGRPDKISEDLPYFDLETLCVATKNFSDSNKLGQGGFGPVYKGVFSDGQEVAVKRLLTGSEQGSEEFINEVLLILKLQHKNLVRLLGFCLDAEEMLLVYEFLPNGSLDAFLFDPRQRARLSWIKRVDIIGGIARGTLYLHEDSRLKIIHRDLKASNILLDYDMNPKISDFGMARIFAGAEGEASTATIVGTYGYMAPEYAMEGLYSIKSDIFSFGVLLLEIITGRRNAAFYHSKNAPSLLAYAWHLWNGGNALELMDPLVADSCPEDQFLVYMHVGLLCVQEDAYDRPTMSSVVLMLKSQSPTLGQPQRPPFCVGRIIDNEQSSVNNLPISDILPQ 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1693 657 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Acco01g1693 657 SUPERFAMILY Protein kinase-like (PK-like) 329 638 IPR011009 -
Acco01g1693 657 Gene3D Phosphorylase Kinase; domain 1 312 422 - -
Acco01g1693 657 Pfam Protein tyrosine and serine/threonine kinase 350 615 IPR001245 GO:0004672|GO:0006468
Acco01g1693 657 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1693 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Acco01g1693 657 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 422 - -
Acco01g1693 657 CDD STKc_IRAK 353 619 - -
Acco01g1693 657 Gene3D Transferase(Phosphotransferase) domain 1 423 627 - -
Acco01g1693 657 FunFam Cysteine-rich receptor-like protein kinase 28 27 126 - -
Acco01g1693 657 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 639 - -
Acco01g1693 657 FunFam Liguleless narrow1 423 626 - -
Acco01g1693 657 SMART serkin_6 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1693 657 ProSiteProfiles Gnk2-homologous domain profile. 133 239 IPR002902 -
Acco01g1693 657 FunFam Cysteine-rich receptor-like protein kinase 10 136 239 - -
Acco01g1693 657 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Acco01g1693 657 Pfam Salt stress response/antifungal 143 237 IPR002902 -
Acco01g1693 657 Gene3D - 137 239 IPR038408 -
Acco01g1693 657 Gene3D - 26 127 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1693 Acco-ChrAcco01 30948622 30951169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1693 24 642 Receptor kinase-like Gene Family AT4G05200 41.460 9.50e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1693 PK_Tyr_Ser-Thr 9.5e-47 CL0016