Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1682 ATGCAAAGGAGACAGAAGAATGAGAAAAATAGAAGCAAAATAGACAAGGTTTTCCTGTGTCTCCCTCTCACTCTCCCTCTCTATCCAGGCGAGCTAACCCAATTCTTCATCTCCTTCTATTTGTTATGCCCTTTAATTCTCCAATCTCCTTCGAACCGAAATCGACCCTCCTTCGATGGTGGCGGAGAAAAATCTCGCTCCACTTCTCACCCTGTCGAGGTGGGCCAAAACCCTAACCCTAATTCGGACCCCAACCTGACCCTTTTTCTTTTACTCTCGTCTCTGGAATCTCTGATTTTCATGGACTCTCAAAGATTGTTGCTTTCCCGAGAAAACCCTAGGCCCCTGGGTTTCCCTGCTGGGCGAGTACTCCCTTCTGCCCCTGTAAAATCCATGCCCGTTGAGATGGTTCAGAAGCCAATTGCTCCGGCGATATTGGAACGGTTCAAGGCTCTGCTCAAGCGGCGCTACGATGAACGGGGGTCTTTGGCAGATGACGATGTGCCGCAGCTGCCCACTAAGGAGATTGTGCAGCTTTACGATATAGTCTTGTCTGAGCTTACTTTAAATTCGAAGCCCATCATCACCGAACTTACCATCATTGCAGGAGACCATAAAGAGCATGGCAAGGGTATAGCTGATGCAATTTGCGATCGAATTCTCGAGGTGCCTTCGGAGCAAAAGCTTCCTTCACTATATCTTTTAGACAGTATTGTGAAGAATATTGGTGGGGGGTATGTTAGATACTTCTCCTCACGTCTTCCTGAAGTGTTCTGTGAGGCATATCGACAAGTTCAGCCTAATTTGCACCAGGCAATGCGCCATCTCTTTGGTACCTGGTCTACAGTCTTCCCAACTTCTGTTCTCCGCAAGATTGAAGGACAGCTGCATTTTTCTCAAGCAGTTAATAATCAGAACATATCATCTAGCATTAATCCCCCTCGTGTGTCTGAGGCTATGCAGCGAACTCATGGCATTCATGTTAATCCAAAATACTTGCGACAGCTGGAAAACTCAACTATGGACACTGATGGGGGTGAAATGTTGGATTCAACAGGAAGCGTGGGGCATACAAATTTTGGCCTTGGAACTAATAAGATGCATCAGGCTTCAATTAGCAGGCAGGGAAAACATTATCCTCGTGATGGCCGGAATCAATTCCAATTTTCTACAAATGGGCTTCAACGCCAAAGTCCAAGAGCTCTTATTGATGCTTATGGCAGTGACAAGAGGACAGAAACCTCAAGCAATAAGCCGTTGGTTGAACCGCTTGACATACATGGTATAGAAAACAAGATGGCGTCACCATCATGGCAGAATACTGAAGAGGAGGAGTTTAACTGGGAAGATATGAGTCCAACGTTAGTGGAGCATAAGAGAAGCAATGGTATCTTACCATCATCAATTATGTTATCTAGGGAAAGATCTAGTGGTATTGTTGCAGCTAATGCCGCTGCTTTGGGTCAAGATGCCAGAAGTGATTGGGTTAGTCAATCTCAGCTTCCTCCTATGAATGATCCTTCAATTATAGCAGAAGATGCATTTGTGTTGTTGGGTAATGCTGGTGGATCATTGGGTCAGATAACTGAATTCCAAAATCATGGTCTGGTCTCCCGTCCTCCTCATGATACCTGGAAGATTTCTCATCGTTTGCCTAATTCTTCACAACACCTCGTTAACATGAGAGGTCAAACAAGGAATGCTCATGTGTCTCCTATTGATAGCATTCCAATTACTAAAGTAAACTCATATGGGCTTGAGATTCGTCCACCTACTTTACCTGCCTCTTTCCGAACTAGGCCCCCAGTAAATGTGCATACTAGTCGTCCGCCCTCCTTAAATCCTTCATTGCCGAAACATGTTAGGAACCAATTTGAAGCAATAAGTGGTAGTAATACCATTTTAGATCAAGGTCCTACTAAATCTTTATTCATGCCTGAACAGCTATTGGACAGTGGTGAGAACAATATTGGTAAATTAGTGATTCCTCAGATTCCTAATCAGCTATCAGGGCTAATTTCTTCAAACCAGCGTAACCGTGGGCAAGCATTACAACTTCAAAATTTTCCACCTCAGGATGTGCAAGAAATTTTTGCTGATTCTCAAGCTCCAGCAGCTTCTCAATCTAGTCATGGCGGCTCTTTGCAAAGACATGGTGCTGCTATCAGTGCAACTGGGTCTATGTTGTTACCTAATGGTCAGTTTCCTTTACTAGTCCAAAACATGGCAAACAACACTTTTCCTATACAGCAGGGATCCTTGGCTCCATTTCCAGCTCCCCGTCCTCCCTCACAAGCGTTGTCTCATACAAATGGTAGCCCATATACCTCAAACCAACAGCCAGCTGGTGGATTTTCTGGTCTTATTGGTTCACTTATGGCACAAGGTTTGATTTCATTAACCGGACAAAACCCTGCACAGGATTCTGTTGGAACTGAATTTAATCCCGATGTTCTGAAGATCCGGCATGAGTCTGCGATTAGTGCTTTATATTCTGATCTCCCTCGACAATGCACAACTTGTGGCCTTCGATTCAAGTCTCAAGAGGAGCACAGTTGTCATATGGATTGGCATGTGACGAAGAATCGGATGGCTAAAAATCGTAAGCAGAAGTCTTCTCGTAGGTGGTTTGTGAGTGAGAAAATGTGGCTTAGTGGTGCAGAGGCACTGGGAACAGAAGCAGCACCTGGTTTTTTGCCAACTGAGACTGTGGAGGAAAATAAAGAAGATGAAGAGATGGCTGTGCCGGCTGACGAAGAGCAGAATACATGTGCGTTATGTGGAGAGCCTTTTGAAGAGTTTTATAGTGATGAAACTGAGGAATGGATGTACAGAGGAGCTGTATACCTAAATGTGCCCAAGGGAACAGTGACAGGCATGGATAGGTCACAGTTAGGTCCAATTGTTCATGCTAAATGCAGATCTGAATCTAATGCTGTCCCTGCTGAAGAATTTAGAGAGGATGACGGGGGCGCTGATGAAGAGGGTAGTCTAAGAAAACGAATGCGGAATTAA 3015 0.4471 MQRRQKNEKNRSKIDKVFLCLPLTLPLYPGELTQFFISFYLLCPLILQSPSNRNRPSFDGGGEKSRSTSHPVEVGQNPNPNSDPNLTLFLLLSSLESLIFMDSQRLLLSRENPRPLGFPAGRVLPSAPVKSMPVEMVQKPIAPAILERFKALLKRRYDERGSLADDDVPQLPTKEIVQLYDIVLSELTLNSKPIITELTIIAGDHKEHGKGIADAICDRILEVPSEQKLPSLYLLDSIVKNIGGGYVRYFSSRLPEVFCEAYRQVQPNLHQAMRHLFGTWSTVFPTSVLRKIEGQLHFSQAVNNQNISSSINPPRVSEAMQRTHGIHVNPKYLRQLENSTMDTDGGEMLDSTGSVGHTNFGLGTNKMHQASISRQGKHYPRDGRNQFQFSTNGLQRQSPRALIDAYGSDKRTETSSNKPLVEPLDIHGIENKMASPSWQNTEEEEFNWEDMSPTLVEHKRSNGILPSSIMLSRERSSGIVAANAAALGQDARSDWVSQSQLPPMNDPSIIAEDAFVLLGNAGGSLGQITEFQNHGLVSRPPHDTWKISHRLPNSSQHLVNMRGQTRNAHVSPIDSIPITKVNSYGLEIRPPTLPASFRTRPPVNVHTSRPPSLNPSLPKHVRNQFEAISGSNTILDQGPTKSLFMPEQLLDSGENNIGKLVIPQIPNQLSGLISSNQRNRGQALQLQNFPPQDVQEIFADSQAPAASQSSHGGSLQRHGAAISATGSMLLPNGQFPLLVQNMANNTFPIQQGSLAPFPAPRPPSQALSHTNGSPYTSNQQPAGGFSGLIGSLMAQGLISLTGQNPAQDSVGTEFNPDVLKIRHESAISALYSDLPRQCTTCGLRFKSQEEHSCHMDWHVTKNRMAKNRKQKSSRRWFVSEKMWLSGAEALGTEAAPGFLPTETVEENKEDEEMAVPADEEQNTCALCGEPFEEFYSDETEEWMYRGAVYLNVPKGTVTGMDRSQLGPIVHAKCRSESNAVPAEEFREDDGGADEEGSLRKRMRN 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1682 1004 MobiDBLite consensus disorder prediction 592 618 - -
Acco01g1682 1004 Gene3D - 169 297 IPR008942 -
Acco01g1682 1004 MobiDBLite consensus disorder prediction 54 81 - -
Acco01g1682 1004 Pfam CID domain 186 290 IPR006569 -
Acco01g1682 1004 ProSiteProfiles CID domain profile. 172 300 IPR006569 -
Acco01g1682 1004 MobiDBLite consensus disorder prediction 601 618 - -
Acco01g1682 1004 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 140 993 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Acco01g1682 1004 SUPERFAMILY ENTH/VHS domain 174 301 IPR008942 -
Acco01g1682 1004 MobiDBLite consensus disorder prediction 976 1004 - -
Acco01g1682 1004 FunFam polyadenylation and cleavage factor homolog 4 170 297 - -
Acco01g1682 1004 MobiDBLite consensus disorder prediction 750 781 - -
Acco01g1682 1004 SMART 558neu5 175 297 IPR006569 -
Acco01g1682 1004 ProSitePatterns Zinc finger C2H2 type domain signature. 838 858 IPR013087 -
Acco01g1682 1004 MobiDBLite consensus disorder prediction 977 1004 - -
Acco01g1682 1004 MobiDBLite consensus disorder prediction 764 781 - -
Acco01g1682 1004 CDD CID_Pcf11 177 297 IPR047415 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1682 Acco-ChrAcco01 30685904 30694270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1682 101 469 C2H2 Transcription Factor Family AT4G04885 49.377 3.09e-94 315