Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1677 ATGCGTTGCTTTCCCTGTTGCATTAACCCGTCGGAGAAAGGCGCCGATGAACCAACAGAAGTTTCGAAACGCAGGGCAGAATTGAAATCCTATACGTTGAAATCGATTGTTTCAAATATTTCACTCAGGACAGGTAGCAGCAGGCACAGAAGGATAACCGAAGAGATACAAAAACATGGAGTCGTACAAAATGAAGCTACAGTTTTCACATACAAAGAACTCGGTGATGCAACTGACAGTTTCAGCAATGAACACAAAATAGGCGAGGGGGGATTCGGGGTGGTCTACAAAGGACGCATAAAAAGCATTGATCAAGTTGTGGCTGTGAAGCAACTGGACAGACAAGGAAGGCAAGGAACTAGAGAATTTATCTCTGAGGTTTTGATGTTAAGCTTGTTGAAGCATCCAAACCTTGTCAATTTGATTGGTTATTGCGTTGAAGACGACCACAGGATTTTGACCTACGAATACATGCCCAATGGTAGTCTAGAAGATCGCCTTCTAGACTTGGCTCCAAATAAGGCGCCTTTATCTTGGGATATGAGGATGAAAATAGCTGAGGGGGCTGCAATAGGGCTTGAGTATCTACACGAAATTGCCGAGCCACAAGTAATATACCGTGATTTTAAAGCATCAAATATACTGTTAGATGAGGATTTCAATCCCAAACTTTCTGATTTTGGAATGGCTAAGATGTGTCCAACACAAGGCCAACTCTATATCACCACAAGGGTCATGGGAACCTATGGCTATTGTGCACCAGAGTATGCGGCTACTGGACAACTAACGACCAGGTCTGATGTTTATAGTTTTGGGGTTGTGCTTTTGGAGATAATCTCTGGCAGAAGAGTTATTGACGATACACGAGCTGCAGACGAGCAGAACCTGATCCAATGGGCACAACCTCTGTTCAAGGACAGAAGCAAGTTTACTCTGATGGCTGACCCCTTGCTTGATGGTAACTACCCTGAGAAGGGTCTATTTCGAGCACTTGCAGTGGCAGCAATGTGTTTGCAAGAAGATGCTGAGGCAAGACCTTCAATGGGTGAAGTTGTGGAAGCTCTTGAGCTTCTAACAAAACCAAAAGATAGAGAATCATAG 1101 0.4396 MRCFPCCINPSEKGADEPTEVSKRRAELKSYTLKSIVSNISLRTGSSRHRRITEEIQKHGVVQNEATVFTYKELGDATDSFSNEHKIGEGGFGVVYKGRIKSIDQVVAVKQLDRQGRQGTREFISEVLMLSLLKHPNLVNLIGYCVEDDHRILTYEYMPNGSLEDRLLDLAPNKAPLSWDMRMKIAEGAAIGLEYLHEIAEPQVIYRDFKASNILLDEDFNPKLSDFGMAKMCPTQGQLYITTRVMGTYGYCAPEYAATGQLTTRSDVYSFGVVLLEIISGRRVIDDTRAADEQNLIQWAQPLFKDRSKFTLMADPLLDGNYPEKGLFRALAVAAMCLQEDAEARPSMGEVVEALELLTKPKDRES 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1677 366 SUPERFAMILY Protein kinase-like (PK-like) 62 358 IPR011009 -
Acco01g1677 366 FunFam Serine/threonine-protein kinase CDL1-like 52 157 - -
Acco01g1677 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Acco01g1677 366 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Acco01g1677 366 FunFam Serine/threonine-protein kinase PBS1 158 366 - -
Acco01g1677 366 PANTHER OS07G0668900 PROTEIN 3 363 - -
Acco01g1677 366 Pfam Protein kinase domain 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1677 366 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1677 366 CDD STKc_IRAK 87 358 - -
Acco01g1677 366 Gene3D Transferase(Phosphotransferase) domain 1 158 366 - -
Acco01g1677 366 Gene3D Phosphorylase Kinase; domain 1 41 157 - -
Acco01g1677 366 PIRSF ILK 26 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1677 Acco-ChrAcco01 30597690 30599816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1677 1 363 Glycoside Hydrolase AT3G07070 54.891 5.84e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco01g1677 Pkinase 1.6e-48 CL0016