Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1658 ATGTTAAAGGGTGGAATTTTTCCTAATGTGGTTTCTTCCAACCTGACGATTGATGGGGCGTGCAAAATTGGTGACTTAGATCTTGCTTTGAAGCTTATCACAAAGATGGCGCTGATGACAGGAGGATCTGGGAAGGAGACAGTGGATATTGACTCTATCAACCTTCTCTCTAAGTTGGAAGCCAAAGAATTGATGATGAGGATGATGATTACGCTGGGTATTCATCCTGACCAGAATACATATGATGCAACTTTTCGTGAGGGTTTCCATTATGATGATCATCAAAAATCAGAGGAAAAAAAAAAAAGACACCACCTTTGCCGCCCCAATACAAAACCCACATTCCCTCTCCCTCTTCTTCTTCTTCCTCTTCCTCGGAGAATCCCCATATCGACAACTATGTCTTGCTCCAATCTGACAATGTGGGTCTCTTCGAAATCTTCTTTATCCGATGCTTCTTCCCTCTCCTTCCGTCATTCCCTTAACCCCTTTTTCCACCTTCCCTCTCAGAATCCATCTCCTTCGCGATCCTCTGCAACGCAAATCCAGTGTGGTCTCCGTGAGCTCAGAGGCCGAATTGATTCTGTGAAGAACACCCAGAAAATCACTGAGGCCATGAAGCTCGTCGCCGCCGCGAAAGTCAGAAGAGCTCAAGAAGCTGTCGTTAATGGCAGACCTTTCTCTGAGACCCTTGTCGAAGTCCTTTACAATATCAACGAGCAGCTCCAAACTGAAGACGTCGATACTCCCCTCACAAAAGTTCGGCCTGTTAAGAAGGTGGCTTTGGTTGTTTGTACTGGAGATCGAGGTCTCTGTGGGGGTTTCAATAACCAAATCATTAAAAAGACTGAAGCAAGAATCGCTGAATTGAAGGTTCTGGGTCTTGATTATACCATCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTCATTCGTAGGCCTTATATCCCAGTGGATAGATTTCTCGAACAAGGAACTCTTCCAACTGCAAAAGAAGCTCAAGCCATTGCTGATGATGTTTTCTCTTTATTTGTAAGTGAAGACGTTGATAAGGTTGAGTTGTTATACACAAAATTTGTGTCTTTGGTGAAATCCGATCCTGTGATTCATACTCTACTTCCTTTGTCACCAAAAGGAGAGATCTGTGATGTGAATGGTGTCTGTGTGGATGCTGCTGAAGATGAGTTCTTTAGGTTGACCACAAAGGAAGGAAAGTTGACTGTTGAGAGAGATGTTATGAGGACCAAGACAGACGATTTCTCCCCAATCTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTCGATGCCTTATTGCCTCTGTACTTGAATTCTCAGATTCTTAGAGCATTGCAGGAGTCACTTGCCAGTGAGCTTGCTGCTAGAATGAGTGCTATGAGCAATGCTACCGATAACGCTGTGGAATTGAAGAAGAACTTGTCAAGAATATACAACAGGGAACGTCAAGCCAAGATTACTGGTGAAATTCTGGAAATTGTTGCTGGTGCCAATGCCCTATCATAG 1521 0.4379 MLKGGIFPNVVSSNLTIDGACKIGDLDLALKLITKMALMTGGSGKETVDIDSINLLSKLEAKELMMRMMITLGIHPDQNTYDATFREGFHYDDHQKSEEKKKRHHLCRPNTKPTFPLPLLLLPLPRRIPISTTMSCSNLTMWVSSKSSLSDASSLSFRHSLNPFFHLPSQNPSPSRSSATQIQCGLRELRGRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDVDTPLTKVRPVKKVALVVCTGDRGLCGGFNNQIIKKTEARIAELKVLGLDYTIISVGKKGNSYFIRRPYIPVDRFLEQGTLPTAKEAQAIADDVFSLFVSEDVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVMRTKTDDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKKNLSRIYNRERQAKITGEILEIVAGANALS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1658 506 ProSitePatterns ATP synthase gamma subunit signature. 491 504 IPR023632 -
Acco01g1658 506 FunFam ATP synthase gamma chain, chloroplastic 402 505 - -
Acco01g1658 506 Pfam ATP synthase 186 505 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 Hamap ATP synthase gamma chain [atpG]. 183 505 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 Gene3D ATP synthase, gamma subunit, helix hairpin domain 402 505 - -
Acco01g1658 506 FunFam ATP synthase gamma chain, chloroplastic 184 251 - -
Acco01g1658 506 Gene3D Tetratricopeptide repeat domain 1 108 IPR011990 GO:0005515
Acco01g1658 506 FunFam ATP synthase gamma chain, chloroplastic 253 376 - -
Acco01g1658 506 NCBIfam ATP synthase F1 subunit gamma 185 505 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 Gene3D - 252 376 - -
Acco01g1658 506 Coils Coil 465 485 - -
Acco01g1658 506 CDD F1-ATPase_gamma 186 502 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 185 505 IPR035968 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 PANTHER ATP SYNTHASE GAMMA CHAIN 132 505 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 Gene3D ATP synthase, gamma subunit, helix hairpin domain 185 251 - -
Acco01g1658 506 PRINTS ATP synthase gamma subunit signature 483 504 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 PRINTS ATP synthase gamma subunit signature 257 276 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 PRINTS ATP synthase gamma subunit signature 452 471 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco01g1658 506 PRINTS ATP synthase gamma subunit signature 350 367 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1658 Acco-ChrAcco01 30110225 30113449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1658 157 505 Primary Pumps ATPases AT1G15700 69.944 2.36e-176 499