Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1647 ATGCTCGCTGTTTCTTCTTCTTCTTCAACTGCGATTTCAACTTCAGCTTTTAGCTTGTCTCAAATACGGTGCTTGGTGAATTCCGTTACGCTGAAGGATTCAGTTGTTCCTCTTGCAGCAACCATCGGTGCTTCTGGAACTTCACCTATGAGTTCGTCATTCATCATAGTTATATATTTACTATGGCTTGCATCAACGTTGACACTCATACATGGGGCATCAAGGGAAGTAGCTTCAAACCCGGAAGTTGTGAATATTGGAGCTATTATAACATTTAAAACTATAAATGGACGAGTTTCTAAAGTTGCCATCAAAGCCGCAGAGAAAGATGTGAATTCTGATCCACGCATCCTTGGTGGACGAAAATTGTCCATAACCCTGCATGATGCCAACTTCAACGGTTTTCTTAGCTTCATTGGAGCACTCAAGTTCTTGGGGAGAGACTCAGTTGCTATTATCGGTCCACAAACTTCAACAATGGCCCCTGTGCTCTCACATTTGTCAAACGAACTCCATGTTCCCATTCTGTCATTTACAGCTCTGGATCCTACCCTATCACCTCTGCAGTACCCTTATTTTCTGCAAACAGCACCCAACGATCGATTCCAGATGACCGCAGTGGCCGACATGGTTAGCTATTTTGGTTGGAAAGAGATTGTTGCTGTTTATTCTGATGACGATCAAAGTAGAAATGGTATCGCTGTATTGGGAGATAAACTTGCTGAAAAGCGCTGTAGGATATCTTACAAAGCAACACTGCCCCCTGATCCAACTGCTAGTCGAAATGATGTTACTATTCAGTTGACCAAGGTTCAAAGTATGGAGTCCAGAGTGATTGTTCTTCACACCTTCGCCCAGACAGGTCTCTTGGTTTTTGATGTGGCTCAGGAATTAGGAATGATGAGTGAAGGTTATGTCTGGATAGCTTCTTCTTGGCTATCAACTGTTTTAGACTCAAATTCAACACTACATTTGAATACTTCTTACTCAATCCAAGGAGTTCTTACGCTTCGTCCTCACACGCCGCAATCAAAAAGAAAACAGGCCTTTATGTCCAGGTGGAACCAGATAAGCAATGGTTCAGTTGGGTTGAATCCATATGGACTCTATGCTTATGATTCTGTTTGGATCATTGCCCTTGCATTGAAATCATTTTTTGATCAGAAAGGCAATCTTTCATTCTCTAACAATACAAATTTAAACAGAATGAGAGGGGAGACTCTGGATCTTGGTGCACTGAGCGTTTTTAATGGAGGGAGACATTTGCTTGATAACATACTGCGCATTAACATGACCGGATTGACAGGACCTATTCAATTTCATCCGGATAGATCCCCCTTAAATCCATCATATGACGTCCTAAATGTCATTAATAGTAGTTATTATAGGAAAGTCGGGTACTGGTCTAATTATTCTGGGCTGTCTGTTATTCCTCCTGAGAAACTTCACACTAAGCCAGCCAAACGATCAATTTTAAACCAACATCTGTCCAATATAACTTGGCCTGGCAGTACAACAGAAAAGCCTCGGGGATGGGTTTTTCCAAATAATGAAAGACAGCTAAGAATTGGTGTTCCCAATCGAGTTAGTTATCAGAACTTGGTCTCACAAATAAATGGTACCAATAAAGTTCAAGGATACTGCATAGATGTCTTCCTGGCTGCCATTAAATTGCTACAATATGCAGTTCCATACAAGTTTGTTCTGTTTGGAGATGGACAAAAGAACCCCAACTACTTTGAACTTGTCAATGAGATTAATTCTGATGTGTTTGATGGTGTTGTAGGTGACATTGCCATTGTTACTGACCGAACAAGGATTGTGGATTTTACTCAACCATATATAGAGTCAGGCCTTGTTGTGGTTACAAAAGTAAAAGAATTAAAGTCAAGTGCTTGGAATTTCTTGCGACCTTTTACTCCATTAATGTGGGGCGTCACAGCTGTTTTCTTCCTCATTGTTGGAGCAGTTGTGTGGGTTCTTGAACATAGAACAAATGATGAGTTCCGAGGGCCTCCTAGGAAACAAATTGTTACAATTCTTTGGTTTAGCCTCTCCACCATGTTTTTTGCACACAGAGAGAACACAGTTAGTGCACTTGGTCGTATAGTACTAATCATCTGGCTTTTCGTGATTTTGGTAATCAATTCAAGCTATACTGCAAGCCTAACATCAATCCTCACTGTGGAACAACTTTCCTCCCCAATAACGGGAATTGATACCTTGATAACCAGTAATGGACGTATAGGATTTCAAGTAGGATCATTTGCTGAAAACTATCTTTCTCAGGAACTCAACGTACCAAAATATAGACTTGTTCCTCTTGGTTCACCAGAAGAATATGCCATTGCTCTTGAGAGGGGAACTGTGGCGGCTGTTGTTGATGAACGGCCATATGTAGAACTCTTCATGTCAAATTACTGCAAATTCTCCATTAGAGGCCAAGAATTCACCAAAAGTGGATGGGGATTTGCTTTCCGAAAGGACTCTCCTTTATCCATTGATATGTCCACTGCCATACTGACTCTGTCTGAAAACGGTGAGCTCCAGAAGATTCATGAGAAGTGGCTCTCAACACAGGCTTGTGCATCTAAGAGTGCAGAGGAGGGATCTGAGCAGCTTCAGTTAGGAAGCTTTTGGGGCCTGTTTCTGTCATGTGGGGTAGTAAGTTTCGTAGCGCTTCTTGTCTATTTCATCTTGATACTCCTCCAATTCTTCCGTGACTTCCCCAAAAATGATGGTCCTGCTAACGGTGGCAGCTCGCGCTCTGCGCGCATCCAGACATTTCTAAGTTTTGCTGATGAAAAAGAAGACTTGTCACAAAGAAAGCTTAAAAGAAAACGCAAGGATTCTACATAG 2859 0.4166 MLAVSSSSSTAISTSAFSLSQIRCLVNSVTLKDSVVPLAATIGASGTSPMSSSFIIVIYLLWLASTLTLIHGASREVASNPEVVNIGAIITFKTINGRVSKVAIKAAEKDVNSDPRILGGRKLSITLHDANFNGFLSFIGALKFLGRDSVAIIGPQTSTMAPVLSHLSNELHVPILSFTALDPTLSPLQYPYFLQTAPNDRFQMTAVADMVSYFGWKEIVAVYSDDDQSRNGIAVLGDKLAEKRCRISYKATLPPDPTASRNDVTIQLTKVQSMESRVIVLHTFAQTGLLVFDVAQELGMMSEGYVWIASSWLSTVLDSNSTLHLNTSYSIQGVLTLRPHTPQSKRKQAFMSRWNQISNGSVGLNPYGLYAYDSVWIIALALKSFFDQKGNLSFSNNTNLNRMRGETLDLGALSVFNGGRHLLDNILRINMTGLTGPIQFHPDRSPLNPSYDVLNVINSSYYRKVGYWSNYSGLSVIPPEKLHTKPAKRSILNQHLSNITWPGSTTEKPRGWVFPNNERQLRIGVPNRVSYQNLVSQINGTNKVQGYCIDVFLAAIKLLQYAVPYKFVLFGDGQKNPNYFELVNEINSDVFDGVVGDIAIVTDRTRIVDFTQPYIESGLVVVTKVKELKSSAWNFLRPFTPLMWGVTAVFFLIVGAVVWVLEHRTNDEFRGPPRKQIVTILWFSLSTMFFAHRENTVSALGRIVLIIWLFVILVINSSYTASLTSILTVEQLSSPITGIDTLITSNGRIGFQVGSFAENYLSQELNVPKYRLVPLGSPEEYAIALERGTVAAVVDERPYVELFMSNYCKFSIRGQEFTKSGWGFAFRKDSPLSIDMSTAILTLSENGELQKIHEKWLSTQACASKSAEEGSEQLQLGSFWGLFLSCGVVSFVALLVYFILILLQFFRDFPKNDGPANGGSSRSARIQTFLSFADEKEDLSQRKLKRKRKDST 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1647 952 Gene3D - 516 631 - -
Acco01g1647 952 FunFam Glutamate receptor 758 861 - -
Acco01g1647 952 Pfam Ligand-gated ion channel 859 888 IPR001320 GO:0015276|GO:0016020
Acco01g1647 952 CDD PBP1_GABAb_receptor_plant 85 478 IPR044440 -
Acco01g1647 952 SUPERFAMILY Periplasmic binding protein-like I 79 513 IPR028082 -
Acco01g1647 952 FunFam Glutamate receptor 199 358 - -
Acco01g1647 952 Pfam Receptor family ligand binding region 102 457 IPR001828 -
Acco01g1647 952 SMART AABind_6 520 860 IPR001638 -
Acco01g1647 952 PIRSF IGluLR_plant 51 952 IPR017103 -
Acco01g1647 952 Gene3D - 102 448 - -
Acco01g1647 952 SMART GluR_14 522 859 IPR001320 GO:0015276|GO:0016020
Acco01g1647 952 SUPERFAMILY Periplasmic binding protein-like II 498 858 - -
Acco01g1647 952 FunFam Glutamate receptor 516 632 - -
Acco01g1647 952 Gene3D - 199 474 - -
Acco01g1647 952 FunFam Glutamate receptor 632 762 - -
Acco01g1647 952 Pfam Bacterial extracellular solute-binding proteins, family 3 539 858 IPR001638 -
Acco01g1647 952 CDD GluR_Plant 519 857 - -
Acco01g1647 952 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 84 922 IPR015683 -
Acco01g1647 952 Gene3D - 632 765 - -
Acco01g1647 952 Gene3D - 784 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1647 Acco-ChrAcco01 29903185 29909234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1647 53 950 Ion Channels AT2G17260 60.903 0.0 1143