Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1618 ATGCTTCCTGGTTCGGTATTCCCAGTGAATCTTGGCCGTGTAATGGAATCTTCTGAGAGTAATCGGAAGGTGCTCAGTGAAATTGATTTCTTCTCTAACCCAACAAGCAAGCCGTCAGCTCAAGAAATTCATCATCATCATCAAGATGTTGTTAAAACCCTTTCCAATAATATCTCTGTCAAGAAGGAAATTCCTCAGACTCAACCAGTTTCTAGGGGTAACTTGGATATGAATAACGGTTTACAACTGCATACTGGTAATACCAGGAGTGATCAATCTACGTTGGATGATCATGGCGTCTCGTCAGATGCAGACGATAAGCGAGCCAAAAGCAACGAGTTGAAACAACTGCAAGTAGAGGTTCAGAGAATGAACACAGAAAACCAGAACCTGAAAGAGATGCTGAGCCACATGAGCAATAACTACACCGCCCTGCAAATGCATCTCGCTGCATTAATCCAACAGCGACAACAACACAACCAACATGATAATGATCATCATCATCATCAGGTTGCTGGAAAAAGTGAGGAGAAAAAACAGATGACGGCGAGGCAGTTTCTTGAGCTTGGATCAGGTGATGATGATGTGTCCAATTCTAGTTCAGATGAAAGAACTCAATCCGCTTCACCTAATAATGGTAAAAGTGAGACGGGTGTAAGGGAAGAGAGTCCAGAATCAGAATCACAAAAGGCTTATAAGCTTCAGAAACTGAATCCTTCTTCTTCGAATTCCATAATAGATCAATCCACTAATACTGCAACAACAGAAGCCACCATGAGAAAAGTACGTGTCTCTGTCCGTGCTAGATCAGAAGCCCCCATGATCAGTGATGGCTGTCAATGGAGAAAATATGGACAAAAAATGGCTAAAGGAAACCCATGTCCTCGCGCTTATTACAGATGCACTATGGCTGTTGGTTGTCCTGTTCGTAAACAAGTTCAGCGTTGTGCAGAAGACAAAACCATATTGGTAACAACGTACGAAGGAAGTCATAACCATCCATTGCCTCCGGCGGCCATGGCGATGGCTTCAACGACAAGTGCAGCAGCGGGAATGCTACTGTCTGGTTCAATGTCAAGTCCAGAAGGGTTGATGAAGATGAACCCTATGTTAGCAAGAGCCATTCTTAACCCATCTTGTTCTTCAACCATGGCTACTCTCTCCGCTTCAGCTCCTTTCCCTACTGTCACATTGGACCTAACTCAAAACATCAACAACGACAATAATATCAACAACGCAATGCTGCAACAGTTTCAAGTTCACCACCCTAATACGACGCCGTTTCATCAGCTTGTTCAACCATTGTATAACCAATCCAGGTTTTCTGGCCTTCAGTTGTCACAGGATAGGCCTGTCCATCAGCAGTCTTCCACTCCAGCTGACACCGTCGGTAACGCAGCCGCAGCCATCACCGCGGACCCAAACTTCACGGCAGCTCTCGCAGCTGCTATCTCTTCCATCATCCGTGGCAATAATCATCAGAACAACAACGGTGGTAGCAGCAGCAATCCACATATCCTCAACAGTACTTCAATCAGCAGCTTTTCTGGGAATTAA 1557 0.4477 MLPGSVFPVNLGRVMESSESNRKVLSEIDFFSNPTSKPSAQEIHHHHQDVVKTLSNNISVKKEIPQTQPVSRGNLDMNNGLQLHTGNTRSDQSTLDDHGVSSDADDKRAKSNELKQLQVEVQRMNTENQNLKEMLSHMSNNYTALQMHLAALIQQRQQHNQHDNDHHHHQVAGKSEEKKQMTARQFLELGSGDDDVSNSSSDERTQSASPNNGKSETGVREESPESESQKAYKLQKLNPSSSNSIIDQSTNTATTEATMRKVRVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGSHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGLMKMNPMLARAILNPSCSSTMATLSASAPFPTVTLDLTQNINNDNNINNAMLQQFQVHHPNTTPFHQLVQPLYNQSRFSGLQLSQDRPVHQQSSTPADTVGNAAAAITADPNFTAALAAAISSIIRGNNHQNNNGGSSSNPHILNSTSISSFSGN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1618 518 MobiDBLite consensus disorder prediction 56 111 - -
Acco01g1618 518 MobiDBLite consensus disorder prediction 192 217 - -
Acco01g1618 518 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco01g1618 518 MobiDBLite consensus disorder prediction 495 518 - -
Acco01g1618 518 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 79 501 IPR044810 GO:0003700
Acco01g1618 518 MobiDBLite consensus disorder prediction 159 183 - -
Acco01g1618 518 SUPERFAMILY WRKY DNA-binding domain 268 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco01g1618 518 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco01g1618 518 Pfam WRKY DNA -binding domain 277 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco01g1618 518 Coils Coil 107 141 - -
Acco01g1618 518 MobiDBLite consensus disorder prediction 96 111 - -
Acco01g1618 518 Gene3D WRKY domain 260 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco01g1618 518 MobiDBLite consensus disorder prediction 56 95 - -
Acco01g1618 518 FunFam probable WRKY transcription factor 31 260 337 - -
Acco01g1618 518 MobiDBLite consensus disorder prediction 230 258 - -
Acco01g1618 518 MobiDBLite consensus disorder prediction 154 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1618 Acco-ChrAcco01 29480308 29482953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1618 7 498 WRKY Transcription Factor Family AT1G62300 51.215 1.36e-141 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco01g1618 WRKY 5.2e-24 CL0274