Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1601 ATGGCGATTCTGGAGCGACTAGGGAGGACTTTTCGGCTATGGCGTTCAATTTCATCTCTCAAAACCCTGACTCCTTCTCCTTGCTCGCGCCACATTACCCGCCCTTTCTCTCACAAGTCTGCGTTTTCGTCTGAGGTTGTCCGTTCTAGAGGTCTTCCTGATGCTGCTGGACCGTATTCATGGTTTCCAGTTGTATTAGCTGGTATTTTTGGGGTTGGAGTTCTAGAAATGGCCTACGCAGATTCTAACGAGTCTGCAGATGAGAGTCGGAAAGAGACTGCCCAGTCTGTACCTTCCTCATCGCCAGTCTTGCCTTCAGGTAATGAGGATTTGGAAGGAGTTGCCAAGAAATTACGGTCCCAAATAATGCTGAAACTTGTAAATAGAGGAATTTCAGCTGCCTCCCATCCTGATTTCACTGTTTCTGTTAAAGGTCAAAAGGTCAGCATCAGGTTCCAAATTCCTCCTGCATGTGAAGTTTCCCATCTTCTTGCCAATCTTGTTTCCCAACTTGGAGTGAAGACTGAAGAGAATGGGGGTGGTTCAGACATGTTAATCCGTGCTTGGGACAGCACTGTTGCATGGCAACTTACCCTTAGTCGCCCTCCAAAGCAAATGGATATACAAGGGAATCCAAGTGATGACGATCTATGCATACTCATATATTATCCTATCATCAGCCCTGACAAAGCTGAGATTGAATTCATTAAGCATGGGAGCCTGAGTACTGAAGAGCTTGATGCTTTTGTATCCATTTTAGAAATAGCTGGCAAAAAGTTGGGACAAAGAAAAGCCCCATATAGGAGACCAAGGGGAGAGACAGAAAAGATTCCATCTGTAGATAAATCTATAGCAAATCTTGAATCAATGGGAGTGAGAATTTATGGGCTCAATGAACCTCAAACGGGTATCTCAAATGGTGAGATTTCTTGGGACAACATTGCCGGTTATGATAACCAGAAACGAGAAATAGAAGATACAATACTATTAGCTTTACATAGACCTGAAGTATATGATGATATTGCTCGTGGGACTCGTCATAAGTATGAAACAACCAGGCCACAAGCAGTGCTCTTTGAGGGTCCACCAGGTACAGGGAAAACCTCTTGTGCTCGTGTTATAGCTAGTCAAGCGGGTGTCCCATTGCTGTATGTACCTCTGGAGGTAGTCTTGTCCAAATACTATGGTGAAAGTGAGCACTTGCTAGGAAAAGTTTTTTCTCTTGCGAACGAACTTCCCAAGGGTGCTCTTATTTTTCTGGATGAGATTGATTCCTTTGCCGCTGACCGTGATAGGGAAATGCATGAAGCTACACGCAGGATATTGTCAGTCTTATTGCGTCAGATTGATGGATTTGAACAGGATAAGAAAGTGATTGTCATAGGTGCTACAAACAGAAAGCAAGACCTTGATCCAGCGTTAATCAGTCGGTTTGATACTATGATCACTTTTGACCTTCCTGATCATGATAACCGTAAGGAAATAGCAGCCAAATATGCCAAACATCTTACAAAACCAGAATTAGATGAACTTGCCAGAATTACAGAAGGTATGTCTGGAAGAGACATCAGAGATGTTTGTCTGCAAGCTGAAAGGTCCTGGGCATCAAAGATTATTCGAGGAGAAGTATCAAAAGGAGATGAAACTTGTCTTCCACCTCTGCAAGAATATAAGGATAGTGGCTCCAATAGGCGAAAAGCTTTGCTTAGTGCCGTAGCAAATCAGAAATTCCGAAGTTCTTCTCCCAATTGCAAAGGAAGCCAGCTAGATCTGATTTGA 1779 0.434 MAILERLGRTFRLWRSISSLKTLTPSPCSRHITRPFSHKSAFSSEVVRSRGLPDAAGPYSWFPVVLAGIFGVGVLEMAYADSNESADESRKETAQSVPSSSPVLPSGNEDLEGVAKKLRSQIMLKLVNRGISAASHPDFTVSVKGQKVSIRFQIPPACEVSHLLANLVSQLGVKTEENGGGSDMLIRAWDSTVAWQLTLSRPPKQMDIQGNPSDDDLCILIYYPIISPDKAEIEFIKHGSLSTEELDAFVSILEIAGKKLGQRKAPYRRPRGETEKIPSVDKSIANLESMGVRIYGLNEPQTGISNGEISWDNIAGYDNQKREIEDTILLALHRPEVYDDIARGTRHKYETTRPQAVLFEGPPGTGKTSCARVIASQAGVPLLYVPLEVVLSKYYGESEHLLGKVFSLANELPKGALIFLDEIDSFAADRDREMHEATRRILSVLLRQIDGFEQDKKVIVIGATNRKQDLDPALISRFDTMITFDLPDHDNRKEIAAKYAKHLTKPELDELARITEGMSGRDIRDVCLQAERSWASKIIRGEVSKGDETCLPPLQEYKDSGSNRRKALLSAVANQKFRSSSPNCKGSQLDLI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1601 592 CDD RecA-like_protease 342 484 - -
Acco01g1601 592 SMART AAA_5 353 488 IPR003593 GO:0016887
Acco01g1601 592 Gene3D - 308 486 IPR027417 -
Acco01g1601 592 MobiDBLite consensus disorder prediction 86 109 - -
Acco01g1601 592 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 306 531 - -
Acco01g1601 592 ProSitePatterns AAA-protein family signature. 458 477 IPR003960 GO:0005524|GO:0016887
Acco01g1601 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 530 IPR027417 -
Acco01g1601 592 Gene3D - 487 541 - -
Acco01g1601 592 MobiDBLite consensus disorder prediction 92 106 - -
Acco01g1601 592 Pfam ATPase family associated with various cellular activities (AAA) 357 485 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1601 Acco-ChrAcco01 29155033 29161645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1601 353 556 Calmodulin-binding Proteins AT3G56690 34.906 9.46e-26 110