Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1598 ATGAAACCCTCGAGACAGCAACGAGTTTGCAAGGTCTTGTGTTGCAGCTGTAATTGCAGGCTCAGTGTTTCTTCTTCCTCAGACTTAGAAGCTGCAGAAAGCAGTTCTTCTTCTTCATCAGCTTCTCATAGGTTTCCTTCTGTTTCAAGCTTAGCTCATGCCATGGTTCAAGAGAGGCTTGATCAAATGATAAGATCAGAGCAGAGAGAGAAGCTTCATCATCTTCATCGTCATCCTCGTCTTCATCATCAGAATCTGCAGAAACCATCAAGAGATGAAGAAGAAGAAGAAGGTGGTGGTGGAACCAAGTTCGTGGTGATGGTGGCGATGGAGAAGAGTTCATATGATCCAAGAGAGGATTTCAGAGAGTCCATGGTGGAGATGATAATGGCGAATCGGCTTCAAGACGTCAAAGAACTAAGAAGTCTGTTAAATTATTATGTTTCAATGAATTCACAAGAGTACCATAGCCTTATACTTGAGGTCTTTCATGAAGTTTGTACTCATCTCTTTTTATCATCATCATCGTCATCATATAAATGTCAATATTGGTAA 555 0.409 MKPSRQQRVCKVLCCSCNCRLSVSSSSDLEAAESSSSSSSASHRFPSVSSLAHAMVQERLDQMIRSEQREKLHHLHRHPRLHHQNLQKPSRDEEEEEGGGGTKFVVMVAMEKSSYDPREDFRESMVEMIMANRLQDVKELRSLLNYYVSMNSQEYHSLILEVFHEVCTHLFLSSSSSSYKCQYW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1598 184 ProSiteProfiles OVATE domain profile. 110 169 IPR006458 -
Acco01g1598 184 MobiDBLite consensus disorder prediction 85 100 - -
Acco01g1598 184 NCBIfam uncharacterized plant-specific domain TIGR01568 108 171 IPR006458 -
Acco01g1598 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 35 173 IPR038933 GO:0045892
Acco01g1598 184 Pfam Transcriptional repressor, ovate 114 171 IPR006458 -
Acco01g1598 184 MobiDBLite consensus disorder prediction 71 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1598 Acco-ChrAcco01 29080837 29081391 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Acco01g1598 Ovate 4.2e-21 No_clan