Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1583 ATGGAGTTACTTGTGGCAATCGGAACGGGAATTGTGTCAAAACTTGGTGAGATGTTAGTGGATCCAATCACATCAGAATTCAAACATCTGATTCACTGTGACAAAAATATCAACCAAATGAAGAATGAACTCAACAATTTGGAAGACAGGAAGCTTGCGATTGAAGGAATGGTGGACGTAGACAGAAGAAATGGACGTCACATTGCCCCAAATGTTGAATATTGGCTCTACCAAGTGGACAACATTATAGAAAACGAATCACATAAAGCGTACGATGATGATGAGTTAGTCAACAAGAACAAGAAATGCCTTAATGGCTTGTGTCCAAATTTGGTGTTTCGTTATTCACTGAGCAAGAAAGCAAGAAAAATGACACAAGATCTTGTTTCCCTGAAGGAGCAAAAAATTGAGTTCATATCTTACCCTGCACCTTTACCAACACTAGGATCCACCTTCAAAGAAGGCATCAAGAGCTTTGCTTCAAGAGAATCAATTATGAGAGAGGTTGTAGAGAAATTAAAGGGCGATGAGTTCCACAGGATAAGTGTTTGTGGGATGGGTGGTGTGGGTAAAACCACATTAGTCAAAGAGCTTATCAAAATTTTACAAGCAGATAAGGTGTTTGATGAAATATCAATGGCTGTAGTGTCCCAAGTTCCTGACTATAGAAAGATTCAAGGTCAAATTGGTGATACCTTAGGCTTGACATTTGACAAGGAAACTCTGCAAGGAAGGGCATGTCAACTATTTGAGAGGCTTAACAAGATCAATAAGGTCCTCCTGGTGCTGGATGATGTATGGACAGAGATGGATTTCGAGTTGATCGGGCTTCCTTCAAATGAGCAATGTCACAAAGGCTGCAAAATTTTATTCACCTCAAGAAATGAAGATGTGTGCCACAGGATGAGAAGTCAAAGGAACTTTGCTATCCCAGTTCTGTCTAAAGAAGAAGCATGGGATCTCTTCAGGGATGCAGTAGGTGGTCATGTTGTGGACAAAGCTGAGATCCATAACATAGCAAAAGAGGTTGCAAATGAATGTGGGGGTTTGCCAATTGCTGTTGTCACAATAGGAAAAGCACTAGGAAACAGGGAGAAGCATGCATGGGAGGATGCACTTGATCAGCTGAGAAAGTCTTCACTAACTTCCTTCTCAGAGATGCAAGAATATTCTATATATTCATGTATCGAATTAAGCTATAACTTTCTAGGCAACGAAGAAGCTAAATTTCTCCTTTTGCTTTGTTGCTTATTCCCAGAAGACTTTGACATTCCTATTGAAGTTCTACTCAGATATGGAGTAGGCTTGGGTTTGTTTAAGGATCTAGGTGCTTTGTTTAAAGCAAGGAATCGAGTGCATACCTTGGTTGATACTCTAAAGAAGCGGTTTTTGTTGTTGGACAGCAATGAGGATGAGTGTGTGAAGATGCATGATGTTGTTCGTGATACTGTCATAACAATTGCATCCAAAGAAGAGCATGGATTTGCAGTGAAATGTGAAGCTGGACAGGAGTCAAAGGAGTTCACATGGCATCATAGTGCAATCTCATTCGTGTTTGATGAGATTAGGATGCATCCTATGAGTTTGCAGTGTCCAAACCTTAGACTTTTACAAGTTTTCTTAAAGAGAAGAGAACCCATTTCAGAAAATTTCTTCCATAACATGAGCAAGCTAACGGTTTTAGGCATAAGCAATCTGTGCATTCCATCAATGTCATCTCCATTTCGATCACTCAACAACCTCTGTACCTTACAGTTGGAAGATTGTCAGGTCGGAGACATATCAGTAATCTGCAAGGAGCTAAGTAAACTGGAAGTGTTAAGCTTTGCCCACTCAAATATCAAAGAATTGCCTGTAGAAATAGGCAAACTTAGCTTTCTTAGACTGTTGGATTTGACAGAATGCAATGATCTTGGTCAGATGTCTTCTGGGGTCCTAACTAGCTTATCAAACTTAGAAGAGCTTTATCTTAGAGTCAGAAATTTTCATTGGGTGGAAAACAATTCCATTCTAGAAGAGCTCAAATCTCTTTCTCATCAGCTAAAAGTTATAGAGATTTCAATTACAGGTATTCATGCTTTTCCAAAAGATTTGGTATTAAAAAACTTGGTTAAGTTCTGGATCTATGTCAATGACCCTACTACTCTTTCTCCTGGCCTTGTTCGTCGAGGATATCTACACCCTAACATCCTTAAATTAGACAGTTTGTACTATAAGGACATTAAAGGGAATGTGGCGATTCAACAGTTGCTTAAGAAATCTGAAATTCTCAACCTTGTGAATGTGAAACAATTAGAAAACGTCCTCTATGAGTTGGATGAAGAAGGTTTTCCACACTTAAAAAATCTCAGCATTGAATTCTGCAATGATCTGAAGTATTTAACAGATAAAAGTGTCTATGCTTCAAGTTGTGTCTTCACACTGCTTCAATCATTGTCTCTGCACAATTTGGACAATTTAAGAGAGATATGCCATGCCAAGAGTTTCACCTTAAACTCTTGCCAATGCTTTGGCAGCTTGAGAGATCTGAAAGTAGAATTCTGCAACAAGTTGAAGTATGTCTTTTCACCATCTCTGGGGTCAAGTGTTAGAATGCTTCAAGTCTTGCATGTGACTGAATGCTATGGGCTTCAATGTATTATCTCCAAAGAAATCCATGACGAGAATTCAGTGATGAAGTTCACAAATTTAGTGGAACTGAAGCTACAAGAACTCCCTAGCCTTGTTGGGTTCGCTATACCAGATCATAAGAATGAGCTTCATCTACTAAAGTCTCAGGTTCAAGAAGAACCGAAGCTTGATAATGGCCAACATCTGCTAGGGTTGAACTCAACACTAGGAGCTACCGATGAATCTGTTCACATTGGTGATACACTATTTGGATCCAAATGGATCCCCCAGTTCCCAAAATTGGAGAAAATCTTTTTACTTGAGTGCTCTTTGTTAGATACTGTCTTTGACTTGAAACAGCCAGAAATGGAAGTCCGGCCAGTTTCTATGTTATTTTCTCAACTCAAAGAAATAGAGATATCTTGGCTTAGCAAGTTAAGACATATTTGGAGTAATGTTCCAAGTTATATTGAAGGCTTTCAGAACTTGAGATCACTCAAAGTTATGAAATGTGATGCTTTAAGAAGTGTCTTCATTCCCACCATTGCCAGAACACTCACACAGCTTCAGAAGCTGGTGATACACAGTTGCCAACTGATGGAGAAAGTTATTGGGGATTATGATGATGGAGGAGAACAAGAGAAAGTGGAAACTCTTTTGTTTGCCAAGTTAGATTCTTTGACACTCAAGGATCTCCCAAGACTTGTGAGCATTTGTTTAGATTGTTATGAGCTAGCTTGGCCATCTCTGAGATATTTATGCATTGAAGGATGTCCCCGGCTGAAGATATCTTCAATGCCAATTCAAAAACTACCAAAACAAGATAATCTCAGTAACTCCTTTTCTGATTCTACCCTCCAGGATATTGGTTCCAGCACTCGCAGGTTTCTCTCTTGTTTCATCGGATTCACCCCCTCACACATTGAGATTTCTAATTCAATGGCCAAATCAAATTTCCAAAGAGCAGGAAGGATTAGCAACCAGGCTAGTTTGATGAAAGACCATATCTCTTCTGATGTCAAGGAATTATATACTAGAGAAGAAATGAGGTCCTGCATGCCAAATCTGGAACAACTTCAAGTCAAAGGCTTGGATTCACTAGACGTCCTGTTCCAGCTTGAACAAAACCATCCTTCCAATTCCAATGCTAGTGTAAACTGTATAGTAAAACTGGAGCCCATGCTAGCAAGTCCAATGGAAATCACCTGCTTCAACAACCTCACGGTGCTAAAATTAGAAGTTTGTCACAATTTAAGATATCTGTTCTCTCATTCCATAGCAAGGCTCCTTGTGAAATTGCAAGATGTGAAGATATCAAACTGTACGATGGTGGAGCAACTAGTCAAAAGTGAAGAAGATGACTCAGTTGTATTTTCTCATCATGCAAGATCTCATGAAGTTTTTGAGAATGCATTACCAAGTCATTCAACATCCATCTCCAAAGAATCATTTGTGTTGGAGTTCCCATCCCTAAAGAGAATCAGCATTGTTAATTGCAGCATGCTAGAAGTTCTCATCAAGAATGGAGGAGAGTGGAGAACTGACGTGACTTCATTTGGTCAAGTGCAATCTCTTACTTTAAGCCACCTACCAAATCTCGTGAACTTCTGCTACCAACCATGTATTCTTGAACAACCATCTTCAGAGAAATACACAGCCGACATCCATCATCAACAAGATCAGGTTGCATATGATGAACAGAGAATGATAATGAATGGTCCTTTTATAAACTGCTTTCGGATTTCACATCTAACATACTTTGCGATAAAGGAATGCAAAAGAATTAGCTGTTTGTTCTCTCCATCATCCTCAGCAAGTCTTGTGCATCTGCAAGAACTAGAGATATGTGATTGTGAGAACATAAAGGAAATAGTATCATCAAAAGAAGAGATTCAGACAAGTTTTTCCAGGATTGTGCTCCCCAGATTGTGGCGTCTAAAACTTGAACGCCTGTTCAACCTTGAAGCCTTCTGTCAAGGTTCCTATGGCTTGGATTTCCCATTACTGCAAGAAGTGTGTTTTGGAAATTGCCATAAGATGGAGGTATTCTCAAATGGATTATCAAACACTCCAAAGCTAAAAGGTATTACCATGAAAGTTGGAAACCTTACTAAGATCATATGGATGGGAGACCTGAACACCACTGCTAAACTTTCCAGAGGAATTTTAACTTTTCAAACATCTGAGACACTTGGGTGGCTCAAGCAGGAACAAGGCATGCTAAGATACTTAATGAAAGAAACAGAGATGACTGTTGAAAGCTTTCAAAGTTTACTGACTCTAGTCCCATCCAATGTGATACACTTGTTTCAGAATCTGAAGAACCTCACAGTAAAAGACTGTGGTTCACTGATTGAAGTGTTTGAATCAGAAGGAGAAAACGAAAAGAAGAGGCATAGCATAATACACTATGAGCTAGAAGTCATGAACTTGCAATTTCTACCTAAGTTGATTCACATATTGAAAAATCATGAAGAGATTTTGGATTTCCAGAAGCTAAAAGTATTGAAGATTGAATACTGTGGCAATTTGAAGGGTATATTGTCACCTTCTATGGCCAAAAGTCTTGTCCAACTAGAGCACCTTCGCGTATATAGTTGTCAGATGATGGAGGAGATAGTCATGAAGGAAGCTGAAGAAGAAGAAAATGAAGGAGCAAATAAAGCTGAGATATTATTGTTTCCATTGCTGAACAAGTTGGAGCTTCGTCATCTTCCCAACCTCAAATATTTTTGCTCAAAAAATTTAGACTTTGAACTTCCATTCTGTGAAGAAATGGTAATTGAAAAATGTCCCAAGATGACAACCTTTTCCCATGGAGCTGTAAGCACACCAAAGCTTCCTAATATATATAAAGGATCCTATGAGTATGTAGACATCATGGGAGACCTTAATCTGACAATCTATCAAGCTTATTCAGGAGATTTGAAGGCAGCACTTCAAAGATCAGAGACAGTCACTTGGATTGAGCAAGATGAAACCCTACTTGGCTACTTAACAAAAGTAACAGAACTGGTTGTTGAAGGTTGTGAAAAGCTGTTGAACTGTGTTCCAACCAACATGCTGCATAGAATGCAACATTTGAAACAGCTCAAGGTTCGAGAATGTTACTCACTGGTTGAGATATTTGAATCAGAAGGAGTAGCAGAAGCAAATAAAGATGAAGAGCATGATGATGCCATGACACCATATCAATATAATCTCCAAGAAATACATTTGTACTCTCTACCAAAACTAATGCGCATATGGAAAAACCATGGTGAAGTAGTCTTAGGATTTCAGAATCTTAAAAAGCTCAACATTGGTTACTGTGATGGTTTAAGAAGTGTGTTCCCTTCTTCCATAGCCAGGACCCTTGTGCTACTGCAAGAGCTATCAGTTTATGAATGTGAGAAGATAGAGGAGATTGTCACAAAACAGGAAGAAGGAGAGTTCAACAAGGCCAAGAACAAGAATATTGTATTCCCAGAATTGAGGTGGCTGACACTTTATCGTCTTCCCAATCTTAAATGTTTCTGCTCCAGTAATTACCAGTTTGAGATGCCATCTTGTAGGGACATAACTATTAAGGATTGCTCAAAAATGGAGACTTCTTGTTATGCAACCATGAGCGCTCTGTGA 6231 0.3903 MELLVAIGTGIVSKLGEMLVDPITSEFKHLIHCDKNINQMKNELNNLEDRKLAIEGMVDVDRRNGRHIAPNVEYWLYQVDNIIENESHKAYDDDELVNKNKKCLNGLCPNLVFRYSLSKKARKMTQDLVSLKEQKIEFISYPAPLPTLGSTFKEGIKSFASRESIMREVVEKLKGDEFHRISVCGMGGVGKTTLVKELIKILQADKVFDEISMAVVSQVPDYRKIQGQIGDTLGLTFDKETLQGRACQLFERLNKINKVLLVLDDVWTEMDFELIGLPSNEQCHKGCKILFTSRNEDVCHRMRSQRNFAIPVLSKEEAWDLFRDAVGGHVVDKAEIHNIAKEVANECGGLPIAVVTIGKALGNREKHAWEDALDQLRKSSLTSFSEMQEYSIYSCIELSYNFLGNEEAKFLLLLCCLFPEDFDIPIEVLLRYGVGLGLFKDLGALFKARNRVHTLVDTLKKRFLLLDSNEDECVKMHDVVRDTVITIASKEEHGFAVKCEAGQESKEFTWHHSAISFVFDEIRMHPMSLQCPNLRLLQVFLKRREPISENFFHNMSKLTVLGISNLCIPSMSSPFRSLNNLCTLQLEDCQVGDISVICKELSKLEVLSFAHSNIKELPVEIGKLSFLRLLDLTECNDLGQMSSGVLTSLSNLEELYLRVRNFHWVENNSILEELKSLSHQLKVIEISITGIHAFPKDLVLKNLVKFWIYVNDPTTLSPGLVRRGYLHPNILKLDSLYYKDIKGNVAIQQLLKKSEILNLVNVKQLENVLYELDEEGFPHLKNLSIEFCNDLKYLTDKSVYASSCVFTLLQSLSLHNLDNLREICHAKSFTLNSCQCFGSLRDLKVEFCNKLKYVFSPSLGSSVRMLQVLHVTECYGLQCIISKEIHDENSVMKFTNLVELKLQELPSLVGFAIPDHKNELHLLKSQVQEEPKLDNGQHLLGLNSTLGATDESVHIGDTLFGSKWIPQFPKLEKIFLLECSLLDTVFDLKQPEMEVRPVSMLFSQLKEIEISWLSKLRHIWSNVPSYIEGFQNLRSLKVMKCDALRSVFIPTIARTLTQLQKLVIHSCQLMEKVIGDYDDGGEQEKVETLLFAKLDSLTLKDLPRLVSICLDCYELAWPSLRYLCIEGCPRLKISSMPIQKLPKQDNLSNSFSDSTLQDIGSSTRRFLSCFIGFTPSHIEISNSMAKSNFQRAGRISNQASLMKDHISSDVKELYTREEMRSCMPNLEQLQVKGLDSLDVLFQLEQNHPSNSNASVNCIVKLEPMLASPMEITCFNNLTVLKLEVCHNLRYLFSHSIARLLVKLQDVKISNCTMVEQLVKSEEDDSVVFSHHARSHEVFENALPSHSTSISKESFVLEFPSLKRISIVNCSMLEVLIKNGGEWRTDVTSFGQVQSLTLSHLPNLVNFCYQPCILEQPSSEKYTADIHHQQDQVAYDEQRMIMNGPFINCFRISHLTYFAIKECKRISCLFSPSSSASLVHLQELEICDCENIKEIVSSKEEIQTSFSRIVLPRLWRLKLERLFNLEAFCQGSYGLDFPLLQEVCFGNCHKMEVFSNGLSNTPKLKGITMKVGNLTKIIWMGDLNTTAKLSRGILTFQTSETLGWLKQEQGMLRYLMKETEMTVESFQSLLTLVPSNVIHLFQNLKNLTVKDCGSLIEVFESEGENEKKRHSIIHYELEVMNLQFLPKLIHILKNHEEILDFQKLKVLKIEYCGNLKGILSPSMAKSLVQLEHLRVYSCQMMEEIVMKEAEEEENEGANKAEILLFPLLNKLELRHLPNLKYFCSKNLDFELPFCEEMVIEKCPKMTTFSHGAVSTPKLPNIYKGSYEYVDIMGDLNLTIYQAYSGDLKAALQRSETVTWIEQDETLLGYLTKVTELVVEGCEKLLNCVPTNMLHRMQHLKQLKVRECYSLVEIFESEGVAEANKDEEHDDAMTPYQYNLQEIHLYSLPKLMRIWKNHGEVVLGFQNLKKLNIGYCDGLRSVFPSSIARTLVLLQELSVYECEKIEEIVTKQEEGEFNKAKNKNIVFPELRWLTLYRLPNLKCFCSSNYQFEMPSCRDITIKDCSKMETSCYATMSAL 2076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1583 2076 SUPERFAMILY L domain-like 961 1405 - -
Acco01g1583 2076 Gene3D Ribonuclease Inhibitor 521 927 IPR032675 -
Acco01g1583 2076 Pfam NB-ARC domain 163 401 IPR002182 GO:0043531
Acco01g1583 2076 Gene3D Ribonuclease Inhibitor 962 1152 IPR032675 -
Acco01g1583 2076 Gene3D Ribonuclease Inhibitor 1618 1821 IPR032675 -
Acco01g1583 2076 Gene3D Ribonuclease Inhibitor 1857 2074 IPR032675 -
Acco01g1583 2076 Gene3D Ribonuclease Inhibitor 1443 1575 IPR032675 -
Acco01g1583 2076 Gene3D - 148 310 IPR027417 -
Acco01g1583 2076 Gene3D - 399 486 IPR036388 -
Acco01g1583 2076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 412 IPR027417 -
Acco01g1583 2076 FunFam Probable disease resistance protein At1g61300 150 307 - -
Acco01g1583 2076 SUPERFAMILY L domain-like 1627 2059 - -
Acco01g1583 2076 Coils Coil 30 57 - -
Acco01g1583 2076 SUPERFAMILY L domain-like 475 881 - -
Acco01g1583 2076 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 938 1144 - -
Acco01g1583 2076 SUPERFAMILY RNI-like 1450 2008 - -
Acco01g1583 2076 PRINTS Disease resistance protein signature 253 267 - -
Acco01g1583 2076 PRINTS Disease resistance protein signature 180 195 - -
Acco01g1583 2076 PRINTS Disease resistance protein signature 347 361 - -
Acco01g1583 2076 PRINTS Disease resistance protein signature 622 638 - -
Acco01g1583 2076 Gene3D Ribonuclease Inhibitor 1217 1438 IPR032675 -
Acco01g1583 2076 Gene3D - 313 398 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1583 Acco-ChrAcco01 28789828 28800554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1583 181 491 WRKY Transcription Factor Family AT5G45050 25.926 1.42e-09 61.6