Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1564 ATGAGGAGGCTGTTTGGCTTAATCGAATACTCGTTCTCATTTGAAATACATATCTGTGTCTTGGTGATTCAGATGGCAAGGGTAAGAGATAGAACGGAGGATTTTAAAGATGCTGTACGACAGAGTGCTCGCTCTTTGGGGTATGATGAGGCCAAATTGGCATCAGTCATGGCTTCTTTTATTATTCACAAACCTCGGCAAAGGTTACCATTTACTAAAGCTGCATTAAAGACGCTAGAGAGTATTGGAGAATTGGACCAGTTCTTGCTGAAGCACAGAAAGGATTATACAGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATAGAACATGAAGTCAGTGCTTTTATTAAAACTTGCCAACAGCAAATTGATGTTCTCAAAAACAGTATTAATGATGAAGAGGAGAATTCAAAAGGTTGGCTTGGCATTGCTGCTGCAAAGTCTAATGCTGACACTATAGCCCACAAACATGGGGTGGTTCTAATTCTGAGTGAGAGACTCCATTCAGTAACTGCTCAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCTATACCACGAAGAAAACTTAACCGTATGACCAAAAAGGATTCTGCAGAAGCTTCAAACTCAGGCAATATGGAGCTCAGAGAAACAGATGAATCACGCAATGAGCCTCTAAGAGTCCAACAGCAACTCTTGGATGATGAAACTCGTGCCCTTCAGGTGGAATTGACTAGTCTTTTAGATGCAGTTCAAGAGACTGAAACAAAGATGGTGGAAATGTCTGCACTAAATCACTTATTATCTACCCATGTTTTGCAACAAGCTCAGCAAATTGAGCGCCTATATGATCAGGCTGTTGAAGCTACCAAGAATGTGGAGCTTGGTAACAAAGAACTATCCCAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTGTTATTTCTTTTTGTTCTCACTTTTTCTGTCCTCTTTCTTGATTGGTACAGCTAA 1002 0.4132 MRRLFGLIEYSFSFEIHICVLVIQMARVRDRTEDFKDAVRQSARSLGYDEAKLASVMASFIIHKPRQRLPFTKAALKTLESIGELDQFLLKHRKDYTDLHRTTEQERDSIEHEVSAFIKTCQQQIDVLKNSINDEEENSKGWLGIAAAKSNADTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRAIPRRKLNRMTKKDSAEASNSGNMELRETDESRNEPLRVQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLLSTHVLQQAQQIERLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSVLFLDWYS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1564 333 SUPERFAMILY t-snare proteins 81 297 IPR010989 GO:0016020|GO:0016192
Acco01g1564 333 Pfam SNARE-complex protein Syntaxin-18 N-terminus 30 110 IPR019529 -
Acco01g1564 333 FunFam Syntaxin-81 like 236 330 - -
Acco01g1564 333 Coils Coil 118 138 - -
Acco01g1564 333 PANTHER SYNTAXIN-18 25 333 - -
Acco01g1564 333 Gene3D - 236 330 - -
Acco01g1564 333 MobiDBLite consensus disorder prediction 199 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1564 89 333 SNARE and Associated Proteins AT1G51740 75.610 5.11e-116 333