Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1538 ATGTTCACTCCCACTAATAATAATTGCAGCAACTATTTCTTCCCTCCTTCTTCATCTTATACTTTCCCTCTTCTTTATCATCCTTCAGCTTTTGAAAACAATAATGCTTCTTCTTCTTCTTTGTCTTCTGCTGCTGCGAATGCCACTGTTTACCATCATGATCATCTTTCTTCTCTCCCTTTCATACCCACTCTAATCCCAGAAGCATTAACCAATAATCTTGCTGCGCCCTCAGAGTATGCTTCTGTGGTCGGGAGACAGCAGAACATTGCTCTCGATTGTAATATCGTTTCTGGTAATTTCATCTCCAACAAGAAGCCTTCTTCCAAGAAGGATAGGCACAGCAAGATTTACACATCTCAGGGTTTGAGAGACCGACGGGTGAGATTGTCCATTGAGATCGCCCGCAAGTTCTTCGATCTACAAGACATGTTAGGGTTCGACAAAGCCAGCAATACTCTCGACTGGCTCTTCACCAAGTCGAAGAAAGCAATTCAAGAGCTAGAGAAGGCACCTCGAAGCAAGAAGAAAAGCAGCAGCACCAGCAAAAGCATCAACAAGAGCTTCTCTTCTTCCTCTGAGAGCGAAGAGGTGGTTTCACCACAGAGGGTGGATTCAGATTCTGGCAAGGCGACAAGGCCAGAAACGGCGGAGAAGGCAAAGAAGGAGTTGAGGGAGAAGGCGAGGGCGAGGGCGAGGGAAAGGGCTAATCACAACAAGGGAAACAGCTTAATGGTGGTGTATGGTGCTGAAACCAGTGAAACAATAAGAAGAGAAGAGCATAATAAGGAAAATGAAGAGTGTACTGTGATCAAAAGGAAGACGAAGCAGCCTTGTAATCTGATGAATTCTTCTAATCATCTCCAAAATCACTTTTTGATCCCTAATCACAAGGAAGCAAGTTTCACCAACAACACCACTTTCATTAACACTACTACTGCTACTACTACTCATGACTACTCAATATTCCCTAATTTGACTCCAAATTGGGACACTAATGGGCCCTCCAATTTCTGTGCTATAACCGATATGAATCTGTCCACAGATCTTCAAATCTATGGGAAGTCTAGGGAAGAGTGA 1080 0.437 MFTPTNNNCSNYFFPPSSSYTFPLLYHPSAFENNNASSSSLSSAAANATVYHHDHLSSLPFIPTLIPEALTNNLAAPSEYASVVGRQQNIALDCNIVSGNFISNKKPSSKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIQELEKAPRSKKKSSSTSKSINKSFSSSSESEEVVSPQRVDSDSGKATRPETAEKAKKELREKARARARERANHNKGNSLMVVYGAETSETIRREEHNKENEECTVIKRKTKQPCNLMNSSNHLQNHFLIPNHKEASFTNNTTFINTTTATTTHDYSIFPNLTPNWDTNGPSNFCAITDMNLSTDLQIYGKSREE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1538 359 ProSiteProfiles TCP domain profile. 110 168 IPR017887 -
Acco01g1538 359 MobiDBLite consensus disorder prediction 178 199 - -
Acco01g1538 359 Pfam TCP family transcription factor 109 240 IPR017887 -
Acco01g1538 359 MobiDBLite consensus disorder prediction 168 242 - -
Acco01g1538 359 ProSiteProfiles R domain profile. 222 240 IPR017888 -
Acco01g1538 359 MobiDBLite consensus disorder prediction 200 238 - -
Acco01g1538 359 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 85 296 IPR005333 GO:0003700
Acco01g1538 359 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1538 Acco-ChrAcco01 27598068 27599302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1538 51 346 TCP Transcription Factor Family AT1G67260 31.307 7.93e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco01g1538 TCP 3.4e-39 No_clan