Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1531 ATGATCACATCTCTTTCTATGGCCTTAGGGCTTATGGTAGACTCGTTGATGGTGGTCCTATGGCAACCAACCAGGTGTATTCACAGTAAAATCATGATTGTTGATGACTGTACAACTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGACAAAGAAGGAAAATTCTCTCTAACTCTGTGGTTGTCATTATGGTCTGAACACTTAGTCCTGCAAGCAGGGGAGGTTAGTGCATTTCAATCCTTTTAA 291 0.3918 MITSLSMALGLMVDSLMVVLWQPTRCIHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDKEGKFSLTLWLSLWSEHLVLQAGEVSAFQSF 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1531 96 SMART pld_4 23 50 IPR001736 GO:0003824
Acco01g1531 96 PANTHER PHOSPHOLIPASE D 26 84 IPR015679 -
Acco01g1531 96 Pfam PLD-like domain 25 67 IPR025202 -
Acco01g1531 96 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 23 50 IPR001736 GO:0003824
Acco01g1531 96 Gene3D Endonuclease Chain A 19 90 - -
Acco01g1531 96 SUPERFAMILY Phospholipase D/nuclease 24 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1531 Acco-ChrAcco01 27330425 27331288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1531 27 94 Phospholipase D Gene Family (Wang group) AT3G05630 60.494 2.50e-25 96.3