Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1424 ATGTCTTCTGGTGGTTCTTCGTGGAGTGAAAAGGACAACAAAGCCTTTGAAATGGCTCTGGCTGTTTATGACAAGGAAAGACCAGACCGTTGGGACAACGTTGCTAAGGCTGTTGGCGGCAATAAAACCCCAGAACAAGTGAAGAAGCAATACGAACTCCTTGTCGAAGACCTCAAGCGTATTGAGTCTGGCCAAGTGCCCGATCCTCCTTACAAGTAG 219 0.4795 MSSGGSSWSEKDNKAFEMALAVYDKERPDRWDNVAKAVGGNKTPEQVKKQYELLVEDLKRIESGQVPDPPYK 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1424 72 CDD SANT 7 55 IPR001005 -
Acco01g1424 72 SMART sant 4 57 IPR001005 -
Acco01g1424 72 Pfam Myb-like DNA-binding domain 6 51 IPR001005 -
Acco01g1424 72 Gene3D - 1 67 - -
Acco01g1424 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 72 IPR044636 GO:0003700
Acco01g1424 72 FunFam Transcription factor SRM1 1 68 - -
Acco01g1424 72 SUPERFAMILY Homeodomain-like 6 63 IPR009057 -
Acco01g1424 72 ProSiteProfiles Myb-like domain profile. 6 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1424 Acco-ChrAcco01 25041970 25042188 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco01g1424 Myb_DNA-binding 1.1e-05 CL0123