Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1409 ATGCTCTTCCTCCTCCTCTTCACCTCCATCCTCTCCTTTCTCCACTGTGCGACGTCGTTACCTTCCAATGCCTCCCTCTCTCTCTGCCTCAAAATCTTCAACTGCGGCAACATTCACAACATTCCCTACCCCTTCACCGGCGCTGACCGTCCCTCCTTTTGCGGACCGCCGGAATTTCATCTTGCCTGCAGGAGCGATTTTCCCGTGCTGAACATCTCGTCCGTGAGTTACCGAGTTCTCCAGCTCGACCCAATCGGACGTGTTCTCACCTTAGCACGTATAGACCTCTGGAACGAAACATGTACTCACCACTTAGTCAATTCCACTTTTGACCAAACCAACTTTAGGTACGGTTCAGGCAATGGGAATCTCACTTTGATCTATGGACGTGGTTCTTCTTCTGAGATTAATGTTAAGCCAGAGAATTTGTTTGAGTGCGAGTTTAATGGGAATCGAAGCGATTCTTATTCTGTGATTGGTCCGTTACCGCAGGACCCTGCTCTTGATATTTTTCATTGTGATACTCGTGTTGAGGTGCCGATTCTTCAACGTGAAGTCACTAGGCTCATGAATAATCGATCGTTGCTTAGGGAGGTTTTGATGGAGGGTTTTAATGTGAATTATAGCAGTCCTTATGAACATGAGTGCTTGAAATGTGTTGATTTTGGTGGTCAATGTGGATTTGATGACGATTTGGGGAAACCGATTTGCATATGTGGTGATCACCTGTGCCCCTCACCAGAGAAGAAGTCTAAGAGAGGCCTTATAGCAGGCGTTAGTGCAGCAGCAGCTTTTTTAATTCTTATTGGATTATGCACGTTCTTTACGGTAAGGCGAAGGAAAAGAGTTGCAGAACTGTCACAAACCAAGGACCTCCTCATGGCTCCTTATAGCAGAGGCGTTACTTCCTCTACAACAACTTCATCTCAAAGTGTCCCATCTTATGTTACCTCAAAGCCTGAGTCTTTGCAACATAGTTTCTTCTATGGTGTCAAAGTGTTTACCTATGCTGAACTAGAGGAAGCCACTAAGAATTTTGATCCTTCCGTGGAACTTGGTGATGGAGGTTTCGGCACTGTTTATTATGGCATTTTGAAAGATGGACGTGCAGTTGCAGTGAAACGGCTTTACGAAAGCAATCTGAAACGTGTTGAGCAATTCAGGAATGAAGTTGAGATTCTAGCTAGACTAAAGCATAAAAACCTGGTTGAACTTTATGGATGCACATCTAGACATAGCCGAGAGCTTCTCCTTGTCTATGAATACATTGCTAATGGAACAGTGTCAGACCATCTCCATGGGGATCGATCTAAGTCTTCTCTGCTCCCTTGGTGCACCCGATTGAACATCGCGGTAGAAACAGCTGAGGCCCTAGCCTTCCTCCATGAATCCGATGTCATACACCGTGATGTTAAAACCAATAACATCCTCCTAGACCATAACTTTTGTGTCAAGGTTGCTGATTTTGGTCTTTCAAGGTTGTTCCCAAATGATGTTACCCATGTTTCAACTGCCCCACAAGGAACACCTGGTTATGTTGACCCTGAGTATTTTCAGTGCTACCAAGTCACCAATAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTGATCGAGCTCATATCAGCCTTAGAAGCCGTGGACATCACCAGGCACCGGCATGATATAAACTTAGCCAACCTTGCTATCAACAGGATTCAGAACCATCAAGTGCATGAGTTGGTTGATCCACTTCTAGGGATTGAGAGAGACGATGCAGTGAAGAAGATGACAACAGCAGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAAGATGGCGACATGAGACCCTCCATGGACGAGGTGCTGCAGATCTTGAGAGGGATCCAGAAAGAAGGGTATGGTGGACATGAAGAAGTAGAGAAGAAGAATAACAGGGTGGATGAAATCATACTTTTGAAAGATTCTCCTCCCCCATTTTCACCAGATTCAGTAGCTGCTGATAATAACTGGGTAAGTTCCTCTACTACTTCTACTTCCTCATAA 2022 0.4496 MLFLLLFTSILSFLHCATSLPSNASLSLCLKIFNCGNIHNIPYPFTGADRPSFCGPPEFHLACRSDFPVLNISSVSYRVLQLDPIGRVLTLARIDLWNETCTHHLVNSTFDQTNFRYGSGNGNLTLIYGRGSSSEINVKPENLFECEFNGNRSDSYSVIGPLPQDPALDIFHCDTRVEVPILQREVTRLMNNRSLLREVLMEGFNVNYSSPYEHECLKCVDFGGQCGFDDDLGKPICICGDHLCPSPEKKSKRGLIAGVSAAAAFLILIGLCTFFTVRRRKRVAELSQTKDLLMAPYSRGVTSSTTTSSQSVPSYVTSKPESLQHSFFYGVKVFTYAELEEATKNFDPSVELGDGGFGTVYYGILKDGRAVAVKRLYESNLKRVEQFRNEVEILARLKHKNLVELYGCTSRHSRELLLVYEYIANGTVSDHLHGDRSKSSLLPWCTRLNIAVETAEALAFLHESDVIHRDVKTNNILLDHNFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYFQCYQVTNKSDVYSFGVVLIELISALEAVDITRHRHDINLANLAINRIQNHQVHELVDPLLGIERDDAVKKMTTAVAELAFRCLQQDGDMRPSMDEVLQILRGIQKEGYGGHEEVEKKNNRVDEIILLKDSPPPFSPDSVAADNNWVSSSTTSTSS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1409 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Acco01g1409 673 FunFam Wall-associated receptor kinase-like 20 423 631 - -
Acco01g1409 673 Pfam Wall-associated receptor kinase galacturonan-binding 29 91 IPR025287 GO:0030247
Acco01g1409 673 SMART serkin_6 346 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1409 673 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 321 422 - -
Acco01g1409 673 Pfam Wall-associated receptor kinase C-terminal 169 241 IPR032872 -
Acco01g1409 673 Gene3D Phosphorylase Kinase; domain 1 317 422 - -
Acco01g1409 673 MobiDBLite consensus disorder prediction 658 673 - -
Acco01g1409 673 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 667 IPR044652 GO:0004672
Acco01g1409 673 Pfam Protein tyrosine and serine/threonine kinase 351 617 IPR001245 GO:0004672|GO:0006468
Acco01g1409 673 Gene3D Transferase(Phosphotransferase) domain 1 423 632 - -
Acco01g1409 673 SUPERFAMILY Protein kinase-like (PK-like) 320 621 IPR011009 -
Acco01g1409 673 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Acco01g1409 673 ProSiteProfiles Protein kinase domain profile. 346 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1409 673 MobiDBLite consensus disorder prediction 646 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1409 Acco-ChrAcco01 24582217 24585769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1409 31 673 Receptor kinase-like Gene Family AT1G25390 42.576 6.67e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco01g1409 PK_Tyr_Ser-Thr 2.1e-49 CL0016