Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1391 ATGGGTGACAGCACGAAGCAGAAACTAGCTATTGGAATCGATCTTGGAACAACATACTCATGTGTTGCAATGTGGCAGCATGATCGAGTAGAAATCATCGTAAACGACCAAGGAAATAGAACGACACCATCTTATGTTGCATTCACTGATACTCAAAGGATGGTCGGTGATGCCGCGAAGAACCTAGCTGCACATAACCCTGCTAACACTGTCTTTGATGCCAAGAGATTAATTGGTTGGAGATTTGATGATTCCCATGTTCAGAGTGATATAAACCTTTGGCCATTTAAGATCATTTGTGGAAAAGATGAAAAGCCCAAAATTGTTGTAAATTTTAAATCACAGGAAAAGCAGTTTTTACCAGAAGAAATCTCATCCATGGTATTAGCAAAGATGCGTGAGATTGCAGAGACATATCTTGGTTCATCAGTTGAGAATGCAGTTGTCACTGTGCCTGCCTATTTCAATGACTCTCAACGTCAAGCAACCAAAGATGCAGGCACAATTGCTGGGCTTAACGTGATGCGAATAATTAATGAGCCCACCGCTGCAGCAATTGCATATGGTCTTGACAAGCAAAATGACCATGAGAAGAACATATTTGTCTTTGATCTTGGTGGTGGTACTTTTGACGTCTCTCTTGTCACAATTAACAAGGGTAACTTTGAAGTTAAAGCAGTTGATGGTGACACACACCTTGGGGGAGAGGACTTTGACAACAGAATGGTGAAGTACTTTGTCGATGACTTTAAGAAGAAGCATAAGAAGGATATTAGTGGGAGTCCAAAAGCCCTTAGGAGGTTGAGAAGTGCTTGCGAGAGAGCAAAAAGAGCGCTCTCATCTCCATCCATTGTGGACACAATTGTTGAGGTTGATGCGTTATATGAGGGCATCGACTTTTATTCAACAATCACCCGCGCTAGGTTTGAAGAACTAAACAAAGATCTCTTCACAAAGTGTTTAGAAATTACAGAAATGTGTCTTACCTATGCCAAGATGGACAAGAAAAATATTGATGAAGTTGTCCTTGTTGGTGGCTCTACAAGAATTCCTAAAATCCACCAGCTATTACAGGACTTTTTTAATGGGAAGCATCTATGTCAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCCGCCATATTAAGTGGGCATGATAATAAAAATTTACAGGGCATTGTCTTGAGAGATATTACCCCATTGTCCTTAGGTATTTGTCTAAATAGTGGTATCATGCAAGTAGTAATCCCAAGGAACACTAGCATTCCTACATCAATGTCGTCAGATGTAACCACTGCGTTTGACAACCAAACAGTGGTCTCGTTTGATATTTTTCAAGGTGAGAGAACAAGAGCTAATGATAACAGCTGGTTGGATACGTTTAAGGTAACCATTCCCCCCGAACCAAAGGGTGTTCCTAGTTTCAAAGTTTGCTTTTACATTGATGAGAATGGGATCTTGAAAGTCTCTGCCAAGGAAGCTAGAACAGGGAACGAGAATGGAATAACAATAACCAATAGAGAAGGAAGACTATCAAAAGAAGAGATTGAAAGGATGGTTCAAGAAGCTGAGATATACAAGGCTGATGATGAGAGGTACAAGAAGAAAGCTGAAGCAAAAAATGCTTTGGAGGACTATTTATACAAAATCAAGAATGCTCTGCGTAATCAGGTGATTGGCTCAGGGCTTTTAGATTCAGATAAGAAGAAGATTGAGGATATGGTTGAAAGAGCCTCAAAGCTGGTTGATGACCAAGATCTTGCTGAAGTTGATGAGTATGAGCATGAGATGAGAGAGCTCAAGAGAGCGTCTTTAATCCCATAA 1839 0.4067 MGDSTKQKLAIGIDLGTTYSCVAMWQHDRVEIIVNDQGNRTTPSYVAFTDTQRMVGDAAKNLAAHNPANTVFDAKRLIGWRFDDSHVQSDINLWPFKIICGKDEKPKIVVNFKSQEKQFLPEEISSMVLAKMREIAETYLGSSVENAVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKQNDHEKNIFVFDLGGGTFDVSLVTINKGNFEVKAVDGDTHLGGEDFDNRMVKYFVDDFKKKHKKDISGSPKALRRLRSACERAKRALSSPSIVDTIVEVDALYEGIDFYSTITRARFEELNKDLFTKCLEITEMCLTYAKMDKKNIDEVVLVGGSTRIPKIHQLLQDFFNGKHLCQSINPDEAVAYGAAVQAAILSGHDNKNLQGIVLRDITPLSLGICLNSGIMQVVIPRNTSIPTSMSSDVTTAFDNQTVVSFDIFQGERTRANDNSWLDTFKVTIPPEPKGVPSFKVCFYIDENGILKVSAKEARTGNENGITITNREGRLSKEEIERMVQEAEIYKADDERYKKKAEAKNALEDYLYKIKNALRNQVIGSGLLDSDKKKIEDMVERASKLVDDQDLAEVDEYEHEMRELKRASLIP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1391 612 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Acco01g1391 612 Gene3D - 193 367 - -
Acco01g1391 612 Gene3D - 72 127 - -
Acco01g1391 612 FunFam Heat shock 70 kDa 234 319 - -
Acco01g1391 612 FunFam heat shock 70 kDa protein-like 72 127 - -
Acco01g1391 612 Coils Coil 588 608 - -
Acco01g1391 612 Gene3D - 11 385 - -
Acco01g1391 612 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Acco01g1391 612 Gene3D Actin; Chain A, domain 4 234 319 - -
Acco01g1391 612 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 549 IPR029047 -
Acco01g1391 612 Coils Coil 541 561 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 208 218 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 397 416 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 147 167 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 370 390 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 477 493 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 37 49 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 338 354 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 9 22 - -
Acco01g1391 612 PRINTS 70kDa heat shock protein signature 59 67 - -
Acco01g1391 612 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 544 IPR029047 -
Acco01g1391 612 Gene3D - 545 609 IPR029048 -
Acco01g1391 612 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 607 IPR029048 -
Acco01g1391 612 FunFam Heat shock 70 kDa protein 391 545 - -
Acco01g1391 612 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Acco01g1391 612 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Acco01g1391 612 SUPERFAMILY Actin-like ATPase domain 196 389 IPR043129 -
Acco01g1391 612 Pfam Hsp70 protein 10 608 IPR013126 GO:0005524|GO:0140662
Acco01g1391 612 PANTHER HEAT SHOCK PROTEIN 70KDA 10 581 IPR013126 GO:0005524|GO:0140662
Acco01g1391 612 FunFam Heat shock protein 70 11 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1391 Acco-ChrAcco01 23880905 23883024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1391 10 606 Calmodulin-binding Proteins AT3G12580 67.333 0.0 833