Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1388 ATGGTCTTCTCTTCCTTTCCACTCTATCATCTAGATCCACCACCCAACTGGCCTCACCAGCAACTTGATCAGCAGCCAGAAGGACTGATTCATGCCCAGAGTTCCCAGGTTCCTCGTCCTCCGCCGCCACAACCGGTTGCTGATGCCTGTGATGGCGGCAAAGTCTCGACGAGGCCAGGATCCATGGCCGATCGAGCTCGGATAGAGAAGGTAGCACAGCCAGAACCGGCACTGAAATGTCCACGGTGCGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCACGTTGAGGAACGTCCCAGTCGGAGGAGGTTGCAGAAGGAAGAACAAAAGAACCAAAGGAACTAACAGCAGCAAATCATCAAAATCTCCCAACGAAGCTGCATCAACATCAGGTCATCACTTATTACCATCTCCACCATTACTGTTTCCTCTTCCTCCTCCTACATCTCATAGTAGTTACAGTGACTACGACGTTTTTGGGACAACAAACATCAAAGATGCTGAATTTCAAATTGCTTGTAGTAATAATATAATTGGCAATAATAACATCAATGGCTTTATTAGTACTACTGAGCAATGGAAGCTACCAAATCTCCTGCAGCATCATCAACAGTTTCCTTCAACATTCTTGAGTAATTTGGAGGCTCCACCTGCAGTAGGGTTATATCATCAGTTTGAAAGATCAGAAAATAGTCCTGAGATAATCGAACCTTCAACGACAATGTTATATTCTGGTGGTAGTGGAAATATTGGTAGTGATCATCATCATCTTCAGCTTACTGCTACAGTTAAAATGGAGGAAAATATGGATCAAGTGGTGGGTTTATCCAAGAGTCTCACGGGTAACTTGGAAAATAATAATAATAATAATAAACAATTCTGGGAAGGAAATAATAATGGCAGTGCAAGGAATATCAATCAATTTTCTATTAGTTTCGCTTCTTCTTCTTCTTCGGCCGCCACCCATCTCGTGTGA 1044 0.4425 MVFSSFPLYHLDPPPNWPHQQLDQQPEGLIHAQSSQVPRPPPPQPVADACDGGKVSTRPGSMADRARIEKVAQPEPALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGTLRNVPVGGGCRRKNKRTKGTNSSKSSKSPNEAASTSGHHLLPSPPLLFPLPPPTSHSSYSDYDVFGTTNIKDAEFQIACSNNIIGNNNINGFISTTEQWKLPNLLQHHQQFPSTFLSNLEAPPAVGLYHQFERSENSPEIIEPSTTMLYSGGSGNIGSDHHHLQLTATVKMEENMDQVVGLSKSLTGNLENNNNNNKQFWEGNNNGSARNINQFSISFASSSSSAATHLV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1388 347 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Acco01g1388 347 MobiDBLite consensus disorder prediction 14 54 - -
Acco01g1388 347 MobiDBLite consensus disorder prediction 122 164 - -
Acco01g1388 347 MobiDBLite consensus disorder prediction 138 154 - -
Acco01g1388 347 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 65 277 IPR045174 GO:0003700|GO:0006355
Acco01g1388 347 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Acco01g1388 347 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1388 Acco-ChrAcco01 23823274 23824635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1388 23 320 C2C2-Dof Transcription Factor Family AT3G55370 38.344 9.02e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco01g1388 zf-Dof 5.4e-32 No_clan