Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1375 ATGAGCAATGCTCTTGTACCAACACTGACTTCATCACGTCTTCAATATGGAAACAATGAAATTCTGTTGGAGAATTTCACAGCTTGCATGCAGATGGAGGACCTAATCAGTCAATTTCACAACAACGGATTGTACATGGAACCTACAATGATGCCGACCCATTCTCAGTCTCCATCCCTTGTTCAACAAGGAAGGCTATATGGTCCATCCAGCAACAAAGACATTTCAAAGCAGTTACCTACTAAGAGACCTTCAGAAGAACCTCCATATGATGTGGCAAGAGGAGATGCAAGAAAACGTCCGTTTGATGCATTTGGTTACAACATCGAAACTCTTACAAATTTGAAAGCAAAATGTCATAAAACAAGCACAGACACTTCACACAAAATTCCGAGGAACAATAGTTTGCATCCACCTGTGAGAAGAAATCAAAAGCTCAGTGATAAAATCACTACTCTACAAAAGCTGGTTTCGCCATTTGGTAAGACTGACACTGCTTCAGTTCTTCAAGAGACTTCTCTTTATATCAAGCTTCTGCAAGAGCAAATCTGGAGTTAG 558 0.4032 MSNALVPTLTSSRLQYGNNEILLENFTACMQMEDLISQFHNNGLYMEPTMMPTHSQSPSLVQQGRLYGPSSNKDISKQLPTKRPSEEPPYDVARGDARKRPFDAFGYNIETLTNLKAKCHKTSTDTSHKIPRNNSLHPPVRRNQKLSDKITTLQKLVSPFGKTDTASVLQETSLYIKLLQEQIWS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1375 185 MobiDBLite consensus disorder prediction 49 96 - -
Acco01g1375 185 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Acco01g1375 185 MobiDBLite consensus disorder prediction 49 78 - -
Acco01g1375 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 183 IPR036638 GO:0046983
Acco01g1375 185 CDD bHLH_AtbHLH_like 141 183 IPR045239 -
Acco01g1375 185 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 50 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1375 Acco-ChrAcco01 23517709 23530531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1375 129 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G05170 61.017 2.33e-13 64.3