Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1372 ATGTCTTTCCAGCATAAAAGCTTTTGGATGCCACGGAATGCAGGATGCCTAGCTGATGAAAATATGGGTTATGAGAATTCTTCCAGAATTGAACCAAAGCGTGGTCATCAATGGTTTGTGGAAACAGGTGAACCAGAAATTATCAGCAACAACAAGAAGCAAGCTATTGAAGCTGTTGATGGCAGGCCAGTTTCAGGGGTTTCACAAATGGATGTATCTCATTGGGACACTAACTCTGGGTTTCACTCAGTTACTGGTCAATTTTCTGAACGTCTCTTTGGATCTGAGCCTGCAAGGACTTTAAATTTGGTTGATAAGAACATGCCTTCAATTGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAACAATTATGGAAATGATCCAGCAGTAGGGCTGTCAATATCTCATGCTATTGAGGACCCTTCATCTTGTCTCAATTTTGGTGGCATCCGAAAAGTTAAAGTTAATCAAGTTAGAGATGCTAACAATTGCATGCCTGCATCCATGGGGCACTCATATAGTAGGGCAGATAATAATGCAATTCTGATGGTTGCTGGCTACAATAAGAATATTGTCTCCGCGGGTACTGCAATAACTAAGGCTGATGAGAATCTTGGTTCAATGGGTCATGCATTCAATAAAGGAGATGGAAGTTTTATGCTGATGGGCCACCCTTATGGCAAGGGAGATGAAAGCGTCTTATCTATGGGTCAGCCCTTTGACAGGGGAGATTGCAATTTCATGTCAATAGGTCAATCATATGAAAAGGAAGATGGCAACTTGATATCCTTGGGCAACTCATACAACAAGGGGCATGACAACTTTATGCCAATGGGCCCAGCCTATAGTAAATCAGGAGAAAATTTCATTTCAATTTCTCCTTCCTATGACAAGGGAACTGATCATATCATGTCAGTGGGTCCTACGTATGGCAAGGTGGATTCAAACATCGTATCAGCCAACCCTTCATATGATAAAGGAGATTCGAACTTGGGTCACAACTACAATAAGAATGAGGGTTGTACCATATCTTTTGGAGGCTTTAATGATGATCCTGAGCCAAATCCCTCAGGTGGGATCATTAGTGGCTATGAGTTGTTGATCGGCAACCAGAACTCAGTTCATGGTTTGGATGGCCAGAAGGACCTAGCTGAGTCAAACTCTGAAACAGTTGTAAATAGCAATCCAAAATCCAATTCTAAAACTGATAATGTTCCTAAAAGTAAGGAATCGAGGACAAGGAAGGTTCCTTCTAATAACTTTCCTTCAAATGTCAAAAGTCTGTTATCAACTGGAATTTTTGATGGTGTTCCTGTAAAGTATGTTTCTTGGTCTCGGGAGAAATCTCTTCAAGGAGTCATAAAAGGTACTGGGTATTTGTGCTCCTGCAATGAATGCAAGGAGGAGTCCAAGTCTCTTAACGCATACGAGTTTGAGCGTCATGCGGGTGCCAAGACCAAACACCCAAACAACCACATTTACTTTGAGAATGGGAAAACCATTTATGCTGCTGTTCAAGAGCTGAAGAACACTTCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTTACTGGATCTACCATCAACCAAAAGAATTTCCGAGTCTGGAAAGCATCATACCAAGCTGCTACTCGGGAACTTCAGCGTATATATGGGAAAGATGAAGTGATCATCCCAACTTAA 1692 0.4137 MSFQHKSFWMPRNAGCLADENMGYENSSRIEPKRGHQWFVETGEPEIISNNKKQAIEAVDGRPVSGVSQMDVSHWDTNSGFHSVTGQFSERLFGSEPARTLNLVDKNMPSIGSGNLNMGRKDFENNYGNDPAVGLSISHAIEDPSSCLNFGGIRKVKVNQVRDANNCMPASMGHSYSRADNNAILMVAGYNKNIVSAGTAITKADENLGSMGHAFNKGDGSFMLMGHPYGKGDESVLSMGQPFDRGDCNFMSIGQSYEKEDGNLISLGNSYNKGHDNFMPMGPAYSKSGENFISISPSYDKGTDHIMSVGPTYGKVDSNIVSANPSYDKGDSNLGHNYNKNEGCTISFGGFNDDPEPNPSGGIISGYELLIGNQNSVHGLDGQKDLAESNSETVVNSNPKSNSKTDNVPKSKESRTRKVPSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKSLQGVIKGTGYLCSCNECKEESKSLNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTSQEMLFDAIQNVTGSTINQKNFRVWKASYQAATRELQRIYGKDEVIIPT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1372 563 PANTHER AUTOIMMUNE REGULATOR 8 515 - -
Acco01g1372 563 MobiDBLite consensus disorder prediction 388 405 - -
Acco01g1372 563 MobiDBLite consensus disorder prediction 388 425 - -
Acco01g1372 563 Pfam Tify domain binding domain 455 510 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1372 Acco-ChrAcco01 23414987 23422413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1372 417 544 PHD Transcription Factor Family AT3G53680 53.906 3.06e-38 148