Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1363 ATGATGATATCGAGGGGACTGTTCGGATGGTCCCCACCCCATATACAGCCGCTCACGCCGGTGTCGGAGGTATCTGAGCCGCCAGAGTCGCCGTCGCCTTATTTAGACCCCGGAGCTGAGACCTCTGCGTCCCACCAGGTTGAAGTGGAGGAGGAGATGGAGGAGCCTGAGGAGATTGAGCCACCGCCCGCCGCAGTGCCCTTCTCCAGGCTCTTTGCTTGCGCGGACCGGCTTGATTGGACTCTGATGGTCGTTGGCTCCCTGGCAGCAGCTGCTCATGGTACAGCCCTCGTAGTCTACTTACACTACTTTGCGAAGATCATTAATGTCTTGGGGAGGGATCCTTCGCAAGGTCCGCAGGAGCAATTCAACAAGTTCAAGGAGCTTGCTTTAACCATAGTTTATATTGCTGCGGGTGTTTTTGCTGCTGGTTGGATAGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATCAGATCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGATACATATGGGAATAATGGAGATATTGTGAGCCAAGTATTAAGTGACGTGCTGCTCATTCAGTCTGCACTTAGTGAAAAAGTCGGAAATTATATCCACAATATGGCTACGTTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTGGCTGCTGGAGGAATATCAAATATATTCCTACATAGGCTGGCAGAGAATATTCAAGACGCATATGCTGAAGCTGCTAGCATTGCTGAACAGGCGGTTTCTTATATCAGGACATTGTATGCATTTACAAATGAAACATTGGCCAAGTATTCGTATGCTACTTCACTTCAAGCTACTCTAAGATATGGTATCTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGCTCGTGTGCATTGCAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGAAAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCCTGGGTTTGAATCAGGCTGCAACAAACTTCTACTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTATGAGATGATAAGCAGGTCATCCTCATCTGTTAATCATGATGGAGCTGCCCCAGATTCTGTGCAAGGGAATATAGAGTTTAGGAATGTTTATTTTAGCTATCTATCTCGTCCTGAAATCCCTATATTAAGTGGGTTTTATCTGACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTTGGCAGAAATGGATCTGGAAAAAGTAGTATAATTCCACTCATGGAGCGGTTCTATGATCCCACATTAGGGGAGGTTCTTTTAGATGGTGAGAACATTAAGAATCTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTAGTCACTCAGGAGCCTGCTTTGCTTAGCTTGAGTATAAGAGATAACATTGCTTATGGTCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCCAAGATAGCCCATGCACATACATTCATCAGCTCATTAGGGAAAGGTTATGATACACAGGTTGGAAGGGCTGGCTTAGCCTTGACAGAAGAACAGAAGATAAAGCTTTCTATTGCCAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTAACTGGTGGACTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTTTGGATCTTCTAATGTTGGGGCGTTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTATTGACCTTGGATGGCTTATATGCAGAGCTCCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTAGAAACTACAAGGAGACTGCAGCTTTCCAAATCGAGAAGGACTCACCCTCAAGTCATAGCTTTAAAGAACCATCATCCCCCAAAATGATGAAGTCGCCTTCCCTTCAGAGAATTTCTAATGTATTTCGGCCTTCAGATGGCATCTATAGCTCACAGGAATCACCAAATATTCGGAGCCCACCGCCAGAAAAGATGCATCAAAATGGTCAGTCTATGGATGCAGCAGATAAGGAGCCTTCAATAAGAAGGCAGGACAGTTTTGAAATGAGGCTACCAGAGTTACCTAAAATTGATGTTCAGTCTGTGCATCGACAAAAATCTAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCCAAGAATGAACGCTCCCATTCACAGACTTTTAGTAGACCCCATAGTGATTCTGATGATGTTTCATTGAAGCTGAGAGAAGCAAAAGATACCAAGCATCGAAAACCTCCATCATTTTGGAGACTTGCTAGACTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGGCATCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTTATTGGCCTGGTGGTGACTGCTTACTATAGAATTGATCAAGTTCATCATCTCCGGCAGGAGGTAGATAAGTGGTGCTTAATTATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGAAGAATGATGTTCTCAGCCATGCTACGCAATGAAGCTGGTTGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTGTCCATGCGTCTGGCCAATGATGCTACATTTGTACGAGCTGCTTTTAGCAACCGTCTTTCCATATTTATTCAGGACAGCGCTGCAGTTATTGTTGCTGTTGTTATTGGTGCATTCTTGCACTGGCGATTAGCACTTGTGGCATTAGCAACACTTCCCATCTTGTGTGTTTCTGCAATCGCCCAGAAATTGTGGCTTGCTGGATTTTCTAGGGGTATACAGGAAATGCACCGGAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAATATTTACACTGTTGTAGCATTTTGTGCGGGCAATAAGGTAATGGAGCTCTATAGACTGCAGCTGAAGAAAATATTTAAGCAGAGCTTTTTGCATGGGGTGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTATACTGCCATATGCATAAAAAAAAGTTATATGGATCCACCTACTGCACTCAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCGCTGGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGGCGTAAATCCCTCATTTCAGTGTTTGAAATTATAGACCGTGTACCTAAAATTGACCCTGATGATAACTCGGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTCGTCCTGAAGTTTTGGTATTGAGTAATTTCAGTCTCAAAATCAATGGGGGACAAACAGTTGCAATTGTTGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCATTGATTGAGAGATTTTATGATCCAGTGGCTGGCCAAGTGTTGCTAGATGGGAGGGATTTAAAACTATATAATATGAGGTGGTTGAGGAGCCACCTTGGCTTAGTTCAGCAGGAACCTATTATTTTCTCAACTACCATAAGGGAAAATATCATATATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCAGCGAGAATAGCAAATGCTCACCATTTCATAAGCAGCTTGCCGCATGGTTATGATACTCATGTTGGAATGAGAGGGGTTGACTTGACGCCTGGACAGAAACAGAGAATTGCAATAGCAAGGGTAGTGCTAAAGAATGCACCTATTTTGTTGTTGGATGAAGCTAGTTCATCAATCGAATCGGAGTCAAGCCGTGTGGTGCAAGAAGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCGATGATGAGGCACGTTGATAACATTGTAGTGCTGAATGGAGGACGAATAGTAGAGGAAGGAACCCATGATTCATTGGTGGCAAAAAATGGCCTGTATGTCCGATTGATGCAGCCTCACTTTGGAAAGGCATTGCGTCAACATCGACTTATTTAG 4209 0.4303 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQVEVEEEMEEPEEIEPPPAAVPFSRLFACADRLDWTLMVVGSLAAAAHGTALVVYLHYFAKIINVLGRDPSQGPQEQFNKFKELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHEKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSSVNHDGAAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSPSSHSFKEPSSPKMMKSPSLQRISNVFRPSDGIYSSQESPNIRSPPPEKMHQNGQSMDAADKEPSIRRQDSFEMRLPELPKIDVQSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSDSDDVSLKLREAKDTKHRKPPSFWRLARLSFAEWLYAVLGSIGAGIFGSFNPLLAYVIGLVVTAYYRIDQVHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEAGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVVIGAFLHWRLALVALATLPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICIKKSYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKINGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNMRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLI 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1363 1402 FunFam ABC transporter B family member 20 396 643 - -
Acco01g1363 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 830 1122 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g1363 1402 MobiDBLite consensus disorder prediction 782 798 - -
Acco01g1363 1402 MobiDBLite consensus disorder prediction 18 64 - -
Acco01g1363 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1142 1389 IPR027417 -
Acco01g1363 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 373 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g1363 1402 Pfam ABC transporter transmembrane region 840 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g1363 1402 Pfam ABC transporter transmembrane region 85 356 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g1363 1402 Pfam ABC transporter 1171 1319 IPR003439 GO:0005524
Acco01g1363 1402 Gene3D ABC transporter type 1, transmembrane domain 1054 1142 IPR036640 GO:0005524|GO:0016020
Acco01g1363 1402 Gene3D ABC transporter type 1, transmembrane domain 770 998 IPR036640 GO:0005524|GO:0016020
Acco01g1363 1402 Pfam ABC transporter 427 571 IPR003439 GO:0005524
Acco01g1363 1402 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 381 - -
Acco01g1363 1402 SMART AAA_5 1180 1367 IPR003593 GO:0016887
Acco01g1363 1402 SMART AAA_5 433 813 IPR003593 GO:0016887
Acco01g1363 1402 FunFam ABC transporter B family member 20 70 409 - -
Acco01g1363 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 640 IPR027417 -
Acco01g1363 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1153 1390 IPR003439 GO:0005524
Acco01g1363 1402 CDD ABC_6TM_Pgp_ABCB1_D2_like 819 1136 - -
Acco01g1363 1402 MobiDBLite consensus disorder prediction 661 732 - -
Acco01g1363 1402 MobiDBLite consensus disorder prediction 754 781 - -
Acco01g1363 1402 MobiDBLite consensus disorder prediction 664 719 - -
Acco01g1363 1402 SUPERFAMILY ABC transporter transmembrane region 813 1138 IPR036640 GO:0005524|GO:0016020
Acco01g1363 1402 FunFam ABC transporter B family member 20 1143 1392 - -
Acco01g1363 1402 SUPERFAMILY ABC transporter transmembrane region 69 381 IPR036640 GO:0005524|GO:0016020
Acco01g1363 1402 Gene3D ABC transporter type 1, transmembrane domain 70 657 IPR036640 GO:0005524|GO:0016020
Acco01g1363 1402 Gene3D - 396 643 IPR027417 -
Acco01g1363 1402 Gene3D - 1143 1390 IPR027417 -
Acco01g1363 1402 Coils Coil 252 272 - -
Acco01g1363 1402 MobiDBLite consensus disorder prediction 744 798 - -
Acco01g1363 1402 FunFam ABC transporter B family member 6 1000 1150 - -
Acco01g1363 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 641 IPR003439 GO:0005524
Acco01g1363 1402 PANTHER ABC TRANSPORTER B FAMILY 48 643 IPR039421 -
Acco01g1363 1402 FunFam ABC transporter B family member 6 770 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1363 Acco-ChrAcco01 23267994 23279361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1363 53 712 Calmodulin-binding Proteins AT2G36910 44.362 2.59e-171 545