Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1331 ATGTCTTCTCGTATAGTTGCAGAGCCTGATAACCCAGATACGACGTCGTATCTTAGCTCCATGGAGCTCCATAGTTTCCCGAGTCTTCCCACTGATCATCATGCGTCCCCCACGTTGGGTCAGCTTCTCAAGCATGTCGGAGATGTACGCAAGGAAGCCACCGGAGACGGCAGCGAGACGCCGCTGCATCATGCCCTTGACGTCGGAGATGGCCATGCCGGACTTGGGCCTCGTTCTCTGCCTTTTGTGTTGTCATTTAGTAATCTAACTTACAACGTCAAGGTCCGCCGGAAAATGAGCTTGTCTGCGTTGTTGTGTTCGTGGGAGAGAAATCGTCTTGGCGGCGGCGCCGCCGTTGATGATACAATGGGTGAAGAGAGCTTCTTCTCTAAAACAAAGACCCTTTTGAATGACATATCAGGCGAGGCTCGAGATGGCGAGATCATGGCCGTGATGGGTGCTAGTGGTTCCGGCAAGTCTACTCTCATCGACGCCTTGGCCAACCGTATGGCAAAGGGAAGCTTAAAAGGAACAGTGGCTCTTAACGGCGAGGTCATGAACTCACGGCTTCTCAAGGCAATTTCAGCTTACGTAATGCAAGACGATCTTCTCTTCCCGATGCTCACCGTCGAAGAAACTCTCATATTCGCGGCGGAATTCCGACTGCCGCGAACGCTTTCCAAATCCAAGAAGAAGATGCGAGTCCAAGCTCTAATTGACCAGCTCGGCCTCCACAACGCCGTCAATACTGTAATCGGAGACGAGAGCCACCGTGGCGTCTCTGGAGGCGAACGCCGGCGTGTGTCGATCGGCATTGACATAATCCACGACCCAATCATCCTCTTCCTCGACGAGCCGACCTCCGGGCTGGACTCCACCAGCGCGTTCATGGTGGTGAAGGTTCTTCAGAGAATCGCTCAAACAGGAAGCATCGTGATCATGTCCATTCACCAACCAAGTTACAGAATCCTCGGACTCCTCGACAGAATGATCTTCCTTTCGCGCGGGGAAACCGTCTACAGCGGCTCCCCGACGCAGCTTCCATCCTTCTTCGCCGAGTTCGGCCACCCGATACCGGAAAACGATAACCGCACCGAGTTCGCTCTTGATCTCATCCGCGAACTCGAGGGCTCACCAGGTGGCACCAAGAGCTTAGTTGAGTTCAACAAATCATGGCAGAACAAGAAGCATATTGAAAACACAACAAACTCTAATAATAATCTCAGTCCTGTACAGAGTTCATCTCTCAAAGAAGCCATCAGTGCAAGCATTTCTAAAGGGAAATTAGTTTCAGGCGCGACCAACGCAAACACAACAAGCAGCTCAATGGTTCCCACATATGCAAACCCATTTTGGATCGAACTTGCGACACTTTCGAAACGATCCTTCACCAATTCTCGCCGGATGCCGGAGCTGTTAGCGATGAGACTCGGCACCGTTATGGTCACCGGATTCCTCCTGGCTACCGTGTTCTGGCATTTGGATAATTCTCCGAAGGGAGTTCAAGAAAGACTCGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACCGCCGACGCGCTTCCGGTGTTCCTCCAAGAGAGACACATCTTCATGAGAGAAACCTCCCACAACGCTTACCGGCGATCATCCTACCTAATCTCGCACGCCCTCGTGGCCTTCCCTCCGTTGATCTTCCTCTCCTTAGCCTTCGCCGTCATCACCTTCTTTGCCGTCGGTCTTGACGGAGGATTCTCCGGCTTCGCCTTCTACTTCGCCATCATCCTTGCCTCCTTCTGGGCCGGAAACTCCTTCGTGACCTTCCTCTCCGGCCTCGTCCCCCACGTGATGCTCGGCTACACCATAGTCGTCGCTATTTTAGCCTACTTCTTGCTTTTCAGCGGTTTCTTTATAAACCGAGACCGTATTCCGGTGTACTGGATATGGTTCCATTACATGTCTCTGGTGAAATATCCATTCCAAGCTGTTCTTCAGAATGAATTCGATGACCCAATGAAGTGCTTCGTGAAGGGAATTCAGATCTTCGATAGCACGCCGTTAAGGTCGGTGCCAGAAACGATGAAGATGAAGCTATTGAAGAGTATGAGCGAGACCTTAGGTGTGAACATAACGAGCTCGACGTGCTTGACAACTGGTACAGACATATTGCAACAGAACGACGTTTTGGATTTGAGCAAGTGGAATTGCTTGTGGGTCACTGTGGCTTGGGGCTTCTTCTTCAGGATATTGTTTTACTTCATGTTGTTGTTGGGAAGCAAGAACAAGAGAACATAA 2280 0.5127 MSSRIVAEPDNPDTTSYLSSMELHSFPSLPTDHHASPTLGQLLKHVGDVRKEATGDGSETPLHHALDVGDGHAGLGPRSLPFVLSFSNLTYNVKVRRKMSLSALLCSWERNRLGGGAAVDDTMGEESFFSKTKTLLNDISGEARDGEIMAVMGASGSGKSTLIDALANRMAKGSLKGTVALNGEVMNSRLLKAISAYVMQDDLLFPMLTVEETLIFAAEFRLPRTLSKSKKKMRVQALIDQLGLHNAVNTVIGDESHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLDRMIFLSRGETVYSGSPTQLPSFFAEFGHPIPENDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQNKKHIENTTNSNNNLSPVQSSSLKEAISASISKGKLVSGATNANTTSSSMVPTYANPFWIELATLSKRSFTNSRRMPELLAMRLGTVMVTGFLLATVFWHLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVAFPPLIFLSLAFAVITFFAVGLDGGFSGFAFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPVYWIWFHYMSLVKYPFQAVLQNEFDDPMKCFVKGIQIFDSTPLRSVPETMKMKLLKSMSETLGVNITSSTCLTTGTDILQQNDVLDLSKWNCLWVTVAWGFFFRILFYFMLLLGSKNKRT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1331 759 Pfam ABC-2 type transporter 317 417 IPR043926 GO:0140359
Acco01g1331 759 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 59 745 - -
Acco01g1331 759 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 360 IPR003439 GO:0005524
Acco01g1331 759 SMART AAA_5 145 337 IPR003593 GO:0016887
Acco01g1331 759 Pfam ABC transporter 136 288 IPR003439 GO:0005524
Acco01g1331 759 FunFam ABC transporter G family member 6 125 351 - -
Acco01g1331 759 Gene3D - 125 351 IPR027417 -
Acco01g1331 759 Pfam ABC-2 type transporter 455 663 IPR013525 GO:0016020|GO:0140359
Acco01g1331 759 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524|GO:0016887
Acco01g1331 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 351 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1331 Acco-ChrAcco01 21951946 21954225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1331 135 320 Calmodulin-binding Proteins AT2G36910 30.890 6.54e-11 64.3