Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1319 ATGATCACAGATACGGATCCTCCTCCCGTCGCGCCCTCCGTTTCAGCCTCCACAGATTCTTCCTCACCTCCCTCCTCTTCCAATGCCACGGATTCTTCATCCCATTATGCCTCCGCTCCGCCTTCCGCTTATACCGATCAGGCCGCACAGCTACCGGCGGCGAAACCTGTGATTTTCTCGAACGATTCCTCTTCGCTCTTCAGCGGTGGTGGCATCAGCTATCTCACTGGAAGTCGAAATGGAAAATTCAGCTACGGGTATTCCAGTTTCAAGGGTAAAAGGACTTCAATGGAGGATTTTTATGAGACAAGGATATCAGAGGTTGATGGTCAGATGGTCGCCTTTTTTGCTGTTTTTGATGGTCATGGAGGTTCTCGGACCGCTGAATACCTGAAAAAGAATCTCTTTAAGAATATAAGTAGCCATCCTGACTTTATCAAAGACACAAAGACAGCTATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTGAAAGAGGAAAAGGGTTATCATAGAGATGCTGGGTCCACTGCATCAACAGCTGTATTGGTGGGGGATCGACTTGTGGTTGCCAATGTTGGTGATTCTAGAGTAGTTGCTTCTAGAGCTGGTTCAGCTGTCCCTTTGTCAATTGATCACAAGCCTGATAGATCTGATGAACGTAAGAGAATTGAACAGGCTGGGGGATTCGTTATTTGGGCAGGCACGTGGCGGGTCGGTGGCGTTCTAGCTGTTTCCCGTGCATTTGGTGACAAACTTCTTAAGCCATATGTTGTTGCTGATCCAGAAATTCAGGAAGAAGAAATTGATGGTGTAGATTTTATAATAATAGCTAGTGACGGACTTTGGAACGTCATATCAAACAAGGAAGCAGTGTCTTTGGTGCAAAATATAACAGATGCAGAAGAAGCATCCAGAGATCTTATTAAAGAAGCCTACACACGTGGAAGCTCTGACAACATTACTTGTGTGGTTGTTCGATTTGATATATCTTGA 999 0.4505 MITDTDPPPVAPSVSASTDSSSPPSSSNATDSSSHYASAPPSAYTDQAAQLPAAKPVIFSNDSSSLFSGGGISYLTGSRNGKFSYGYSSFKGKRTSMEDFYETRISEVDGQMVAFFAVFDGHGGSRTAEYLKKNLFKNISSHPDFIKDTKTAIVEAFKQTDVDYLKEEKGYHRDAGSTASTAVLVGDRLVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERKRIEQAGGFVIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEEASRDLIKEAYTRGSSDNITCVVVRFDIS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1319 332 Pfam Protein phosphatase 2C 85 322 IPR001932 -
Acco01g1319 332 CDD PP2Cc 83 329 IPR001932 -
Acco01g1319 332 MobiDBLite consensus disorder prediction 10 43 - -
Acco01g1319 332 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Acco01g1319 332 ProSiteProfiles PPM-type phosphatase domain profile. 84 329 IPR001932 -
Acco01g1319 332 FunFam probable protein phosphatase 2C 59 76 331 - -
Acco01g1319 332 PANTHER PROTEIN PHOSPHATASE 38 329 IPR015655 GO:0004722|GO:0006470
Acco01g1319 332 MobiDBLite consensus disorder prediction 1 43 - -
Acco01g1319 332 SUPERFAMILY PP2C-like 76 330 IPR036457 -
Acco01g1319 332 Gene3D - 76 331 IPR036457 -
Acco01g1319 332 SMART PP2C_4 74 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1319 Acco-ChrAcco01 21526447 21534991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1319 57 332 PP2C-type Phosphatase Gene Family AT1G43900 73.188 2.04e-153 433