Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1286 ATGAGGATTATGATAAAAGGTGGTGTTTGGAAAAACACCGAAGATGAAATACTCAAAGCAGCTGTCATGAAATATGGTAAAAACCAATGGGCTCGAATCTCTTCACTTCTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGATGGTATGAGTGGCTTGATCCTTCCATTAAAAAGACTGAATGGACAAGAGAAGAGGATGAAAAGCTTCTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACAATTGCTCCAATTGTTGGCCGTACCCCTTCCCAGTGCCTTGAGCGGTATGAGAAACTCCTTGATGCAGCCTGTGTCAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAATTGCGACCTGGTGAGATTGATCCAAACCCTGAGTCAAAGCCTGCACGACCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCGGAAGCCCGAGCAAGGTTAGCCAACACCAAGGGTAAGAAGGCAAAACGGAAAGCTAGAGAGAAACAACTTGAAGAAGCCCGGAGGCTTGCCTCATTACAAAAAAAGAGAGAATTGAAGGCTGCTGGAATTGATATCAGGCATCGGAGGAGAAAAAGGAAAGGAATAGACTACAATGCAGAAATCCCTTTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAGGATAGATCAGTGGAACAGCCCAAATTCCCTACCACAATTGAAGAACTTGAGGGAAAAAGAAGGATTGATGTAGAAGCACAGTTAAGAAAGCAAGACATTGCGAAGAATAAGATTTCCCAAAGGCAAGATGCCCCCTCTGCTATACTGCATGCCAACAAGCTCAATGACCCAGAAACTGTAAGAAAAAGGTCAAAACTGATGCTTCCACCACCACAAATTTCTGATAATGAATTAGAAGAAATTGCAAAGATGGGTTATGCTAGTGACCTTATGGGGAGTGAGGAAATTGCCGAAGGTGGTGGTGCAACACGTGCTCTTTTGGCCAATTATGCTCAGACTCCTAGCCAGGGAATGACTCCTTTGCGAACTCCTCAGAGAACACCGGCTGGTAAAGGAGATGCTATCTTGATGGAAGCTGAAAATCTGGCAAGGTTAAGGGAGTCTCAGACACCATTGTTGGGAGGAGATAACCCGGAGTTGCATCCTTCAGACTTTTCTGGGGTCACTCCAAGGAAAAAAGAAATTCAGACTCCAAATCCTATGTTGACTCCCTCTGCAACACCTGGAGGTGCTGGCCTCACTCCTAGAAGTGGTGTAACACCAGCAAGGGATGGCTTTTCTTTTGGCATGACTCCTAAGGGAACTCCACTAAGGGATGAGCTTCATATCAATGAAGACATGGATATGCCTGAGAGCACAAAACTTGAGCTTCGTAGACAAGCTGATCTCAAAAGAAGCTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCAAAAAATGAGTACCAGATAGTTATGCAACCAGCTTCAGAAGATGTTGAAGAACCTGAGGAAAAGATTGAAGAGGATATGTCTGACAGAATTGCTCGAGAAAAGGCTGAAGAAGAAGCTCGGCAACAAGCATTACTTAGAAAACGATCTAAGGTCCTTCAAAGGGAGCTTCCTAGGCCTCCTCCTGCGTCACTGGAACTGATAAGAAATTCTTTAATTACTGCTGATGGGGATAAGAGTTCCTTTGTTCCTCCTACTTCTATGGAGCAAGCTGATGAGATGGTAAGAAAGGAGCTTCTAAGCTTACTGGAACATGACAATGCCAAGTACCCACTTGATGAGAAAGTGAATAAGGAGAGGAAAAAAGGAGTCAAGCGTGCTGCAAATGGGCCTGCTATTGTCCCTCTGATTGAAGATTTTGAGGAAGATGAAATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGTTCAGTATCTTCGTGTAGCCATGGGACATGAAAGTGAAGCCCTTGATGAGTTTGTTGAAGCGCACAGAACTTGCCTTAATGATCTTATGTACTTCCCTACCCGTAATGCCTATGGGCTGTCGAGTGTTGCTGGAAACATGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAAAATGTGAGAAAAAAGTTGGATGATGGCAAGGAGAAGGCAGTACGCCTTGAGAAGAAGGTGATGGTTCTTACACAAGGCTATGAGATGAGGTCAAAGAAAAGTCTTTGGCCACAAATCGAAGCCACATTCAAGCTGATGGACACTGCTGCAACAGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCAGCTAGCTGCATCTCATCGGATAAACACTATATGGTCCGAAGTAGAGAAGCAAAAGGAACTTGAGAAAACCTTGCAAAAGAGATATGGAGATCTTCTGGCAGAAGTGGAAAAGGTTCAGAACATTGTGAACCAATACAGGGTGCAATCTAACCAGCAAGAAGTTGCTGCTGCTGCCAATAAGCATTCTCTCGAGTCAGCTGAGGTTGCATCTGATGAAACAAGCACGCAGGGTATTGAGAATGATGAAATTATATCCCACTCAGATGAGCTGGGAAGTGCTATGTTAGTTAGTTCAACACATGATGAAGCTTCAGGACAGCAAGTAGACCTGAAACAAGACGAGGCCACATCAGGCCCCAAAAATGATAAGGGGCAAATGACCCACGACACTGATGTCAAGCACCAAGATGCGACACTGGTTGCAGAGGAGGGGGTCAGCACAACAGTAGTACCAGGTGAGAGCATTGATAGTTGTATCACCCACACGGAGACCACTCCAGACTTGGGTGCTCCAGAGGATACTAGTATTGAGAGACGTGAGGAGGATCAAGGTTTGAAGAATCCAGATAATGCGGCCATAGACTCACATGATGACAAAATACCAGAAACCGCCGATCTGGTTTAG 2910 0.4491 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRHRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRSVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKISQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDNELEEIAKMGYASDLMGSEEIAEGGGATRALLANYAQTPSQGMTPLRTPQRTPAGKGDAILMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGAGLTPRSGVTPARDGFSFGMTPKGTPLRDELHINEDMDMPESTKLELRRQADLKRSLRSGLSSLPQPKNEYQIVMQPASEDVEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPPASLELIRNSLITADGDKSSFVPPTSMEQADEMVRKELLSLLEHDNAKYPLDEKVNKERKKGVKRAANGPAIVPLIEDFEEDEMKDADQLIKEEVQYLRVAMGHESEALDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRKKLDDGKEKAVRLEKKVMVLTQGYEMRSKKSLWPQIEATFKLMDTAATELECFQVLQKQEQLAASHRINTIWSEVEKQKELEKTLQKRYGDLLAEVEKVQNIVNQYRVQSNQQEVAAAANKHSLESAEVASDETSTQGIENDEIISHSDELGSAMLVSSTHDEASGQQVDLKQDEATSGPKNDKGQMTHDTDVKHQDATLVAEEGVSTTVVPGESIDSCITHTETTPDLGAPEDTSIERREEDQGLKNPDNAAIDSHDDKIPETADLV 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1286 969 MobiDBLite consensus disorder prediction 379 462 - -
Acco01g1286 969 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Acco01g1286 969 FunFam CDC5 cell division cycle 5-like 60 120 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 476 492 - -
Acco01g1286 969 Gene3D - 60 114 - -
Acco01g1286 969 Coils Coil 167 187 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 510 528 - -
Acco01g1286 969 SMART sant 58 105 IPR001005 -
Acco01g1286 969 SMART sant 6 55 IPR001005 -
Acco01g1286 969 MobiDBLite consensus disorder prediction 859 891 - -
Acco01g1286 969 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Acco01g1286 969 MobiDBLite consensus disorder prediction 934 969 - -
Acco01g1286 969 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Acco01g1286 969 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Acco01g1286 969 MobiDBLite consensus disorder prediction 476 528 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 113 160 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 859 885 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 915 931 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 213 233 - -
Acco01g1286 969 Coils Coil 683 717 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 915 969 - -
Acco01g1286 969 CDD SANT_CDC5_II 55 106 IPR047240 -
Acco01g1286 969 FunFam CDC5 cell division cycle 5-like 5 59 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 399 413 - -
Acco01g1286 969 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Acco01g1286 969 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 803 IPR047242 GO:0000398|GO:0000974
Acco01g1286 969 MobiDBLite consensus disorder prediction 447 462 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 820 842 - -
Acco01g1286 969 Pfam Myb-like DNA-binding domain 10 70 - -
Acco01g1286 969 CDD SANT 10 53 IPR001005 -
Acco01g1286 969 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Acco01g1286 969 Gene3D - 5 59 - -
Acco01g1286 969 MobiDBLite consensus disorder prediction 113 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1286 Acco-ChrAcco01 21116750 21122135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1286 1 834 MYB-Related Transcription Factor Family AT1G09770 75.895 0.0 1242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g1286 Myb_Cef 8.1e-60 No_clan