LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco01g1236	ATGAAGTCAACGTTTTGTCTTCGTACTGGCCAGAAGAACGGATCACACCACACAATAAAGATGGGAAAGACGGTGGCCGGAGTTGATCCCCTTGGTGAAAAAGCTGTCAAGATGAGAGACTCACTCCAGAACAGCCAGATCATAACAGACGAGGTTGTTGCAATTATGAGTTCCTTTGATCACCGGCTCTCTGCCCTTGAAACCGCCATGCGTCCTATTCAGATTAGAACGCATTCTATTCGGAAGGCTCATGAGAATATTGACAGAACGTTGAAGGCCGCAGAGGTCATTTTGGTTCAATTCGATCAATATCGCCAGGCAGAAACAAAAGTACTTAAAGGGCCACATGAAGACCTGGTGAATTATCTTAATGCAATTGATCAGCTGAGAGGCAGCATTCAATTTTTTGGCAGTAAGAAGGGCTTTAAGAGCGGTGATGGTGTTAGCCAGGCCAATAATTTGATAGCTATAGCCATTTCTAAGCTAGAAGATGAATTTAAATTGCTGTTATCATCTAACAGCCAACCTGTGGAACCTGAGCGACTCTTTGATTGCCTTCCAAACACAATGCGTCCAGCCTCAAGTTCTCCTGGCCTTGAGGGGGATTCTATTGGCAAGAACCCTTCCCATAATCACTCTGATTCACAAAACAATAACATTGATGCTTTTGTATACACACCTCCTTCTCTTGTACCATCAAGAGTTTTGGCATTGCTCCATGATTTAACGGAGCAAATGGTTCAAGCTGGTCAACAGCAAAAGTTACTTAAAATTTACAGGGATACCCGTTCTACTGTATTGGAAAAAAGCCTACACAAACTGGGAGTTGAGAAGCTTAGCAGAGATGATGTACAAGAGCTTCAATGGGAGGTTTTGGAGGCCAAAATTGGAAATTGGATTCACTTCATGCGTATAGCTGTTAAATTATTGTTTGCTGGTGAGCGGAAAGTTTGCAATCAAATATTTGAAGGATTTGATTTACTCAGCGATCAGTGTTTTGCTGAGGTGACTAAAAATAGTGTATCCATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCACCGGAAAAGTTATTTGTGCTTTTGGACATGTATGAAATAATGCAAGAGCTTCGTTCAGAGATTGAAACCCTGTTTGAAAGCAAAGCTTGCGCTGAGAGCAGAGAAGCTGCGTTGGGTTTGACAAAACAGCTTGCACGAACTGCCCAAGAGACCTTTGGAGATTTTGAGGAAGCAGTAGAGAAAGATGCTACAAAAACTGCTGTGACAGATGGAACTGTCCATCCTTTGACAAGCTACGTGATTAACTATGTGAAATTTTTATTCGACTACCGATCCACATTGAAGCAGCTTTTCCAGGAATTTGCTGAGAGAGATGAAACATCAGAGCTGGCCTCTGTAATAATGCGAATAATGCAAGCTCTGCAAACCAATTTAGAGGGAAAATCAAAGCATTATAAAGATCTTGCTTTGACTCATCTGTTTCTCATGAATAATATTCATTATATTGTCAGATCGGTACGGAGGTCTGAAGCCAAGGATTTGCTAGGGGATGATTGGGTGCAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCATTACAAAAGAAATGCCTGGGCAAAGGTACTTCAATGCCTCTCTATCCAAGGCCTTACTTCATCAGGTGGTGGAGGGAGTACTGCAGGTGGCGATGGAGGAACTAGTAGCAGTGGTGCTTCTAGAGCAATTGTTAAAGACAGGTTCAAGACTTTCAATATGATGTTTGAGGAAATACATCAGAAACAATCTCAGTGGGCAGTTCCTGACACAGAGTTGCGGGAGTCTCTAAGGCTTGCTGTTGCTGAAGTCCTGTTGCCTGCTTATAGATCATTTATAAAACGTTTTGGGCCTCTTGTAGAGAATGTAAAGAATGCTCAGAGAATTATCAAATACACCCCAGAAGATCTAGAAAGAATGCTGGGTGAATTTTTTGAAGAGCAAAAGCAAAAATGA	2004	0.4197	MKSTFCLRTGQKNGSHHTIKMGKTVAGVDPLGEKAVKMRDSLQNSQIITDEVVAIMSSFDHRLSALETAMRPIQIRTHSIRKAHENIDRTLKAAEVILVQFDQYRQAETKVLKGPHEDLVNYLNAIDQLRGSIQFFGSKKGFKSGDGVSQANNLIAIAISKLEDEFKLLLSSNSQPVEPERLFDCLPNTMRPASSSPGLEGDSIGKNPSHNHSDSQNNNIDAFVYTPPSLVPSRVLALLHDLTEQMVQAGQQQKLLKIYRDTRSTVLEKSLHKLGVEKLSRDDVQELQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCNQIFEGFDLLSDQCFAEVTKNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELRSEIETLFESKACAESREAALGLTKQLARTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFAERDETSELASVIMRIMQALQTNLEGKSKHYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANHYKRNAWAKVLQCLSIQGLTSSGGGGSTAGGDGGTSSSGASRAIVKDRFKTFNMMFEEIHQKQSQWAVPDTELRESLRLAVAEVLLPAYRSFIKRFGPLVENVKNAQRIIKYTPEDLERMLGEFFEEQKQK	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco01g1236	667	Gene3D	Exocyst complex component Exo70	95	667	-	-
	Acco01g1236	667	MobiDBLite	consensus disorder prediction	189	219	-	-
	Acco01g1236	667	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	78	662	IPR004140	GO:0000145\|GO:0006887
	Acco01g1236	667	Coils	Coil	371	391	-	-
	Acco01g1236	667	Pfam	Exo70 exocyst complex subunit	298	658	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Acco01g1236	667	SUPERFAMILY	Cullin repeat-like	100	662	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco01g1236	Acco-ChrAcco01	19816008	19837837	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco01g1236	28	662	EXO70 exocyst subunit family	AT5G03540	70.588	0.0	903