Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1224 ATGGCCAAACCGATGCCAGTTAGCTCTCGATCAACTTCTCTCAGGGATGACGACCCCGACACTGCCAAGCTCGAAGGCACCGGTAGCTGGGACGCCCTCGAATGGACCAAAATTGAGCCCATCATACGACCCGTTTCGCGGGAAAATTTGGATTTCTTGCTTGAGGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTTTACTTGTTAATAACAACAATGTGGGTACATTAATGGTTACAAATTTTCGCCTCTTATTTGTGAGTGAGAAGACTGCAAAAGTTATTGCCCTTGGAACAATACCACTTGCAACAATCGAGAAGTTTACCAAGATGGCTGTGAAGACTCAATCAACTCTTCGTCAGTTTGACAAATCACCATCACAGAGATTGCTCCAAGTCATTGGAAAGGATATGAGAATTATTGTTTTTGGTTTCAGACCTCGTACAAAACAGAGACGTGCAATATTTGAAGCATTACTGAGATTGACAAAACCTACAAGACTTTGGGATCTCTATGCTTTTGTATCAGGGCCTTCTAGATTAAACAACTCAAACCCAAAAGTTCGCTTACTGGATGAATATTTTCGACTTCTTGGAAAAGGATCTTATCGTGGATCAATCAATATGATCAAAAGTGGGTCTTTTACCTTGTCAAATGCCTCTTGTAGAATAAGCAGTGTGAATTCCAACTATACTATGTGTCAAACTTATCCATTTGCATTGATTGTTCCTAAGAGCATTAGTGATGATGAAGTGCTCCAAGCTTCCACTTTTCGGGCAAGATGTCGGTTGCCTGTAGTCTCATGGTGTGATCCTGGTTCTGGTTGTGTCCTTGCTCGATCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGAAGCAACACAGATGAAAAGCTCGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGGAGGAAGCTATATATTTCTGACGCAAGACCAAGGAAAAATGCATTAGCTAATGGTGCCATGGGAGGTGGTTCAGAGTCATCATCAAATTACTTTCAATCTGAGATAGTCTTCTTTGGGATAGACAACATCCACGCAATGAGAGATAGCTTTGCTAGACTTAGAGAGTACTTAGATACTTATGGAAGAACATCATCAGATGGAATGTCATCTTTATTGAGGAATGGTGGGTGGACATGGGGTGGAGGATTACTAAGTAGTATGTCTGCTTCAGTATCGATGCTTGGGGACAGTGGATGGTTGCTGCACATTCAAAATGTCTTGGCTGGGTCAGCTTGGATTGCTGCTCGTGTTGCTATTGAAAAGGCCTCTGTGCTTGTACATTGCAGTGATGGGTGGGATAGAACAACTCAATTGGTTTCACTTGCTAGTTTGTTGCTTGATCCATACTATCGGACATTCAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTCTCAGATCGTGTTGGAATGCCATCATTCACTGGAAGTGGCAACACCCCTTCTGAGTTGTCTTGGCATTCTTCTGGAAATCTCCCATCACCACCCATGAATCAATCATCAGGAGCATTCAGTTCCCAACCTCCAACCTCTCATGCACAAACTTCAAACAACTACTCTCCAATTTTCCTGCAGTGGGTGGATTGCGTTTCACAATTGCTGCGGACATATCCTTTTGCTTTTGAGTTCTCCTCCGCTTTTCTGGTGGACTTCTTAGACTGTGTGCTTTCTTGTCGCTTTGGAAACTTTTTATGTAACAGTGAGAAGGAAAGGCAGCAATTGAATGTTTTTGAAGCATGTGGATGTTTGTGGGCGTACCTAGCTGAGTTGCGTGCTTCAGAGAGTGGTTCTCATGTGCATTATAACCTCTTTTATAAACCGTTGAAGCATAATGGTCCTCTTCTACCTCCAGCAGCAGCTTTGGCCCCAACTTTGTGGCCCCAATTTCATCTTCGTTGGGTTTGTCCTGAAGAATCACAGGCTGGGCAGATTGAAGTAGAATGTAGGAAGATGGCTTTAAATTTCTCTGAGATGAGGAAGGCTAAAGAAGTGGCAGAGAGGAAAGCCAAAGAAATTGCAAATGCCATGGAATCACTGAAACTAGAACATAGAAACGAGAAGCAACTTAGAATATCAGCAATGAATATAGCCAAAAGGAAAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATGGGATGCAAAGTTTGCTTCTCCGGCAGCGATGACAGTATTGTTGATATTGAGATCTGCCCAGCTGAAGCAGCACAAAACTTGAAGTATTCTCTAACCAGAAAGGAATTTGATGATAAAAAGGATTTGTCTGCTTCAGAAACAATTACAGAAGATGACAATGACGCAAACAATGCTTTTAGTGAAGTATGTGAAACTCTATGCCCATTCCGTACCCAAGACGGATGCTGCAGGTGGCCCAATGCCGCTTGTGCTCATCGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAATTTTGATGCTCTTGATCAACTCTTAATTGATGATGATTATTTCAAGCCTGAGTGA 2541 0.4266 MAKPMPVSSRSTSLRDDDPDTAKLEGTGSWDALEWTKIEPIIRPVSRENLDFLLEAEQVKAQEYGVLLVNNNNVGTLMVTNFRLLFVSEKTAKVIALGTIPLATIEKFTKMAVKTQSTLRQFDKSPSQRLLQVIGKDMRIIVFGFRPRTKQRRAIFEALLRLTKPTRLWDLYAFVSGPSRLNNSNPKVRLLDEYFRLLGKGSYRGSINMIKSGSFTLSNASCRISSVNSNYTMCQTYPFALIVPKSISDDEVLQASTFRARCRLPVVSWCDPGSGCVLARSSQPLVGLMMNMRSNTDEKLVAALCNKLDDGSRRKLYISDARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTYGRTSSDGMSSLLRNGGWTWGGGLLSSMSASVSMLGDSGWLLHIQNVLAGSAWIAARVAIEKASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSFTGSGNTPSELSWHSSGNLPSPPMNQSSGAFSSQPPTSHAQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYKPLKHNGPLLPPAAALAPTLWPQFHLRWVCPEESQAGQIEVECRKMALNFSEMRKAKEVAERKAKEIANAMESLKLEHRNEKQLRISAMNIAKRKNKENVVMKRAIQSMGCKVCFSGSDDSIVDIEICPAEAAQNLKYSLTRKEFDDKKDLSASETITEDDNDANNAFSEVCETLCPFRTQDGCCRWPNAACAHRGSQFVGLKANFDALDQLLIDDDYFKPE 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1224 846 MobiDBLite consensus disorder prediction 496 532 - -
Acco01g1224 846 PANTHER MYOTUBULARIN-RELATED 55 761 IPR030564 -
Acco01g1224 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Acco01g1224 846 CDD PTP-MTM-like 262 551 - -
Acco01g1224 846 Pfam Myotubularin-like phosphatase domain 187 591 IPR010569 -
Acco01g1224 846 Gene3D - 58 163 IPR011993 -
Acco01g1224 846 SUPERFAMILY PH domain-like 53 175 - -
Acco01g1224 846 Coils Coil 677 708 - -
Acco01g1224 846 ProSiteProfiles Myotubularin phosphatase domain. 199 649 IPR010569 -
Acco01g1224 846 MobiDBLite consensus disorder prediction 1 25 - -
Acco01g1224 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 218 653 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1224 Acco-ChrAcco01 19358524 19394654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1224 1 846 Protein tyrosine phosphatase (PTP) family AT3G10550 64.976 0.0 1122