Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1222 ATGGCTGTAAATGAAGATACCGAACGTGAATATGTTCCTCAAAAAGAGAAGCAGTCTTCAGAGGAAGAGAAGAGGAAGAAGAAAATTGTACCTGGGAGTTTGATGAAAGCTTTAATGAGGCCTGGAGGGGGTGACTTGACACCTTCAGATGGTGATCAGATCATATATCATTGTACGATTCGAACTTTAGATGGAGTAATTGTGCAATCTACCCGATCAGAATGCGGAGGGAATGGCATCCCGACAAGACATGTATTGGGCAAAAGCAAGATGCTATTGGGTTTGTTAGAAGCAATTCCAACAATGTTGAAGGGTGAAGTAGCTATGTTCAAGATGAAGCCTCAGTTGCATTTTGGTGAGGATGATTGTCCTGTTTCTGCTCCTGATGGGTTTCCAAAGGAAGATGAACTTCATTTCGAAATTGAGCTGATAGATTTTTTCAAAGCCAAGGTTGTTACTGATGACTTGGGTATTATAAAAAAGGTAATATGTGAAGGGCAGGGATGGGAATCTCCAAGAGAACCTTATGAAGTGAAAGCTTGGATATCGGCAAAGACGGTTGCAGGGAAGTTGATTGTGTCCCACACAGAAGGAGAACCTTATTTCTTTACATTTGGAAAGTCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGAACAATGACACGGGAAGAGAAGGCTGTAATATTTGTTCGTAGTCAGTATCTAACTCAGTCTCCCCTGATGCCTTTGAATGAAGATTATGAAGAAGTCCAGTTTGAAGTGGAGCTTGTCCACTTTATTCAAGTTAGAGATATGCTTGGAGATGGGCGCCTAATAAAACGTCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGCCCTCTCCATGACAGTTTACTACGTGTTCATTACAAGGGTATGGTTCTTGATGAAGAAAAGCGGGTGTTCTATGACACAAGAGTTGATAATGATGGTCTACCACTGGAGTTCTGTTCAGGGGAAGGGCTTGTGCCAGAGGGGTTAGAAATGTGTGTACGTCTGATGCTGCCTGGAGAGGTAGCCCTTGTCACTTGCCCCCCAGACTTTGCTTATGATAAATTTCCTAGGCCGGCAAATGTTCCTGAGCGTGCTAATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAACGCCAAAAGACTGGACGGGATTTGACTTCAAAAGTATAATGGATGACTCTGAGAAGATCAGAAATACGGGTAACAGACTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTACTTCGAGAATTTAATCATGTCAATCCACAAGATGATGAGGAAGGAAAAGTATTTTCAGATACACGTAATTTGCTATATCTGAATGTGGCTGCATGCTATCTGAAATTGGGAGAATTTAGAAAGTCCATTGAATTTTGCAATAAGGTTTTGGATGCAATCCCTGCACATATCAAGGGTCTTTACCGTCGTGGAATGGCCTACTTGGCAGCCGGAGATTTCGAAGAAGCCAAGACTGATTTCAACATGATGATGAAAATTGACAAGTCAGCTGAACCCGATGCAACTGCTGCTCTTCTCAAACTGAAGCAGAAGGAGCAGGAAGCTGAGAAGAAAGCTCGAAAGCAATTTAAAGGCCTTTTCGACAAGAAACCGGGAGAAATTGCAGAAGTCACGGCAGAAGAGGAGGATAAAGATCAGAAGACCAGTGAAAGCAAGGAGGAGGATGAAGGACATGGAGGTTCTGATGGGAGGAGCTCATCAGAGGATTCACATGAAGTTGCGCCTGATGCCCCTCAAATGGGGAGGTTTTCTCGATTTTGGCCAAGCAGATTATTTTCATCCTTTTGGCTTCGAAGATGTACAATTCTGTGA 1872 0.4257 MAVNEDTEREYVPQKEKQSSEEEKRKKKIVPGSLMKALMRPGGGDLTPSDGDQIIYHCTIRTLDGVIVQSTRSECGGNGIPTRHVLGKSKMLLGLLEAIPTMLKGEVAMFKMKPQLHFGEDDCPVSAPDGFPKEDELHFEIELIDFFKAKVVTDDLGIIKKVICEGQGWESPREPYEVKAWISAKTVAGKLIVSHTEGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIFVRSQYLTQSPLMPLNEDYEEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGMVLDEEKRVFYDTRVDNDGLPLEFCSGEGLVPEGLEMCVRLMLPGEVALVTCPPDFAYDKFPRPANVPERANIQWEIELLGFETPKDWTGFDFKSIMDDSEKIRNTGNRLFKEGKYELAKAKYEKLLREFNHVNPQDDEEGKVFSDTRNLLYLNVAACYLKLGEFRKSIEFCNKVLDAIPAHIKGLYRRGMAYLAAGDFEEAKTDFNMMMKIDKSAEPDATAALLKLKQKEQEAEKKARKQFKGLFDKKPGEIAEVTAEEEDKDQKTSESKEEDEGHGGSDGRSSSEDSHEVAPDAPQMGRFSRFWPSRLFSSFWLRRCTIL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1222 623 Gene3D - 2 149 IPR046357 GO:0003755
Acco01g1222 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Acco01g1222 623 ProSiteProfiles TPR repeat profile. 450 483 IPR019734 GO:0005515
Acco01g1222 623 FunFam Peptidylprolyl isomerase 389 545 - -
Acco01g1222 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Acco01g1222 623 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 150 262 - -
Acco01g1222 623 SUPERFAMILY FKBP-like 19 150 - -
Acco01g1222 623 FunFam Peptidylprolyl isomerase 8 150 - -
Acco01g1222 623 FunFam Peptidylprolyl isomerase 151 261 - -
Acco01g1222 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Acco01g1222 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 257 IPR001179 GO:0003755
Acco01g1222 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 144 IPR001179 GO:0003755
Acco01g1222 623 SUPERFAMILY FKBP-like 150 260 - -
Acco01g1222 623 Gene3D Tetratricopeptide repeat domain 395 549 IPR011990 GO:0005515
Acco01g1222 623 MobiDBLite consensus disorder prediction 553 591 - -
Acco01g1222 623 Coils Coil 521 541 - -
Acco01g1222 623 SUPERFAMILY FKBP-like 266 389 - -
Acco01g1222 623 Gene3D - 264 390 IPR046357 GO:0003755
Acco01g1222 623 Gene3D - 150 263 IPR046357 GO:0003755
Acco01g1222 623 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Acco01g1222 623 MobiDBLite consensus disorder prediction 1 28 - -
Acco01g1222 623 SUPERFAMILY TPR-like 398 538 IPR011990 GO:0005515
Acco01g1222 623 MobiDBLite consensus disorder prediction 553 601 - -
Acco01g1222 623 Pfam Tetratricopeptide repeat 485 508 IPR019734 GO:0005515
Acco01g1222 623 Pfam Tetratricopeptide repeat 453 483 IPR019734 GO:0005515
Acco01g1222 623 SMART tpr_5 401 434 IPR019734 GO:0005515
Acco01g1222 623 SMART tpr_5 450 483 IPR019734 GO:0005515
Acco01g1222 623 SMART tpr_5 484 517 IPR019734 GO:0005515
Acco01g1222 623 FunFam Peptidylprolyl isomerase 262 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1222 Acco-ChrAcco01 19295160 19316647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1222 47 549 Calmodulin-binding Proteins AT5G48570 30.620 6.07e-61 211