Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1197 ATGCGGGAAATCAAGGTCCAGAAGCTAGTTCTCAACATCTCAGTCGGTGAGAGTGGAGACCGTCTCACTCGTGCTACCAAGGTACGCATTGTCGCTGGTTCGTGCTTCAGCAACTCAGTGGCCAAACCCCAGTATTCTCGAAAGGTTGTCTCTCGATTGAGGGTCACCGTAAAGCTTATTGTCCAAAACCATCAGGCGAAGGTGTCGGTGGTGCCTTCTGCGGCTGCACTAGTTATCAAGGCCTTGAAAGAACCCGAGCGAGATCGCAAGAAGACCAAGAACATCAAGCACAATGGTAATATATCTCTCGACGATGTGATTGTGGAGAAATAA 333 0.4925 MREIKVQKLVLNISVGESGDRLTRATKVRIVAGSCFSNSVAKPQYSRKVVSRLRVTVKLIVQNHQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIVEK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1197 110 PANTHER 60S RIBOSOMAL PROTEIN L12 51 107 IPR000911 GO:0003735|GO:0005840|GO:0006412
Acco01g1197 110 Gene3D - 78 108 IPR036769 -
Acco01g1197 110 Gene3D - 46 77 IPR036796 -
Acco01g1197 110 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 24 83 IPR036796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1197 Acco-ChrAcco01 18389435 18389848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1197 53 107 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 90.909 1.31e-28 100