Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1196 ATGCTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAGTATTCAGACTAATTCGTCTAGTGATGGGAGTGTCCAGAGATCCCAAAGCATTCCTTTCCGAGCTCCTCAGGAGAATTGCACCTTCCAGGACTTTGAATTGGGGAAGATCTATGGCGTTGGTTCTTATTCTAAGGTTGTGAGAGCAAAGAAGAAGGACACGGGATCTGTATATGCATTGAAGATCATGGACAAAAAATTTATCTCCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGTTAGTGCTTGATAAGTTGGATCATCCTGGCGTTGTGCGGCTGTTTTTCACATTTCAAGACACTTATTCTCTGTACATGGCACTTGAATCTTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGGTTGTCTGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAGTACATCCATAATTTGGGCTTGATACATCGTGATATCAAGCCGGAGAACTTGCTGCTTACAGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATTGCCAAATCATGGACTTCCTTCCAATTGCAGCATCAGATGATAGAGCCAGCACATTTGTGGGGACAGCTGCTTATATCCCACCAGAGGTTCTTAATTCTTCTCCAGCAACATTTGGAAATGACCTCTGGGCCCTTGGATGCACATTATACCAAATGCTGTCAGGAACTTCTCCTTTTAAAGATGCGAGTGAATGGCTTATTTTCCAAAGAATCATAGCTAGAAATATTCAATTTCCAGACTATTTTTCGGATGAGGCAAGGGACCTTATTGACCAGTTACTGGATTTGGATCCCAGCAGGAGGCCAGGTGCCGGACCTAATGGTTATACTGCTTTGAAAAGGCATCCATTTTTCAAGGGAGTGGACTGGAGTAAAATTAGGGATCAAATGCCCCCAAAACTTGCTATGGAACCTGGGTCACCTGAAGGTGATGATGTAAATGATTCGCCATGGAGCCTTTCTCACGTTGGTGATAGTTCTAGGCAACCTGATGGAAATATTGGTGCTGCATCATCTGAGGAGTTTGGTCACATTACTAGGCTAGCCTCAATAGATTCTTTTGATTCAAAGTGGAAACAATTTTTGGATCCTGGTGAATCTGTTATTATGATCTCAATGGTAAAAAAGATGCAGAAATTAAAAAGCAAGAATGTGCAGCTTATCCTTACTAACAAACCAAAGCTAATCTATGTGGATCCATCAAAGCTTATTGTGAAGGGAAATATAATGTGGTCTAATAATCCAAATGAATTAAGCATTCAAGTGACAAGTCCATCTGGTTTCAAGATTTGCACGGATGCCAAGCAAAGAGCTTATCAGTGGAAGAAAGCAATTGAAGAGCTACAAAACCAGTGA 1437 0.4161 MLAMEKDFDSKLSIQTNSSSDGSVQRSQSIPFRAPQENCTFQDFELGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFISKENKTAYVKLERLVLDKLDHPGVVRLFFTFQDTYSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDCQIMDFLPIAASDDRASTFVGTAAYIPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARNIQFPDYFSDEARDLIDQLLDLDPSRRPGAGPNGYTALKRHPFFKGVDWSKIRDQMPPKLAMEPGSPEGDDVNDSPWSLSHVGDSSRQPDGNIGAASSEEFGHITRLASIDSFDSKWKQFLDPGESVIMISMVKKMQKLKSKNVQLILTNKPKLIYVDPSKLIVKGNIMWSNNPNELSIQVTSPSGFKICTDAKQRAYQWKKAIEELQNQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1196 478 Coils Coil 458 478 - -
Acco01g1196 478 SUPERFAMILY PH domain-like 306 477 - -
Acco01g1196 478 MobiDBLite consensus disorder prediction 346 361 - -
Acco01g1196 478 MobiDBLite consensus disorder prediction 325 366 - -
Acco01g1196 478 FunFam 3-phosphoinositide-dependent protein kinase 1 357 478 - -
Acco01g1196 478 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1196 478 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Acco01g1196 478 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Acco01g1196 478 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 327 - -
Acco01g1196 478 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
Acco01g1196 478 Pfam PH domain 383 478 IPR033931 -
Acco01g1196 478 Gene3D - 362 478 IPR011993 -
Acco01g1196 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Acco01g1196 478 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Acco01g1196 478 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1196 478 SUPERFAMILY Protein kinase-like (PK-like) 23 344 IPR011009 -
Acco01g1196 478 MobiDBLite consensus disorder prediction 1 29 - -
Acco01g1196 478 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Acco01g1196 478 MobiDBLite consensus disorder prediction 10 29 - -
Acco01g1196 478 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1196 Acco-ChrAcco01 18358886 18365907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1196 1 478 AGC Kinase Gene Family AT3G10540 77.096 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Acco01g1196 Pkinase 2.8e-66 CL0016