Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1141 ATGACGATCTCGCTCCATTTGCATAAGCAAATCAATGAAGGCTTGTCTTCCTCTAATTCTTGTGATGAAGCCCCAAGATTTGAGACATTATCACCGGGTGAGAAATCTGAGGGAACAAAAATCGTAGCAGATCTTCGTTTTCTAAAAGGCGGCGGCTGTGACGGAAATGGCGCTGGTGGTGGAGACGATGATGGTGATGAAGAAAGTGAGATATCCCAGAAAAGTTGTCTTTTTTGGACTCAGGTCAGGCATAGAGCACTTAATTTTTGGCTTTTGAGAGATTTTACAGTTCAGAGATTTGCAGATGGTGTATATTTTGAGGATGAGTGGATAAAGCGACAGATTTCTACAATGAAATTGATCAGGCACCCAAATGTCATATGCATTTATGAGGAATATGGGCTGCTTCATACAACATGTGGTACACCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGCTATGATGGCACAAAGGCAGATCTTTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTACTTGCCCTTTGAAGATAATAACATTATGGCTTTATATAAAAAGATCTTTAAGGCTGATTTCACATGCCCTCCTTGGTTCTCATCAAGTGCAAAGAAATTAATCAAGAGAATTCTTGACCCCAATCCTGCTACACGAATAACATTTGCTGAGTTCTACAAGAACCTATCTACGGGGCTGAAAGATGTTGTTTGGAAAGCAGAACCTATAGGTGAAGAAACAAATGGTGGTGCTGCGACTGGATCAAGATAG 780 0.409 MTISLHLHKQINEGLSSSNSCDEAPRFETLSPGEKSEGTKIVADLRFLKGGGCDGNGAGGGDDDGDEESEISQKSCLFWTQVRHRALNFWLLRDFTVQRFADGVYFEDEWIKRQISTMKLIRHPNVICIYEEYGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDNNIMALYKKIFKADFTCPPWFSSSAKKLIKRILDPNPATRITFAEFYKNLSTGLKDVVWKAEPIGEETNGGAATGSR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1141 259 MobiDBLite consensus disorder prediction 15 35 - -
Acco01g1141 259 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 134 231 - -
Acco01g1141 259 SMART serkin_6 79 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1141 259 Pfam Protein kinase domain 136 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1141 259 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1141 259 SUPERFAMILY Protein kinase-like (PK-like) 133 230 IPR011009 -
Acco01g1141 259 Gene3D Transferase(Phosphotransferase) domain 1 131 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1141 Acco-ChrAcco01 16989696 16999444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1141 132 231 CBL-interacting serine-threonine protein kinases AT1G30270 88.000 4.87e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco01g1141 Pkinase 8.4e-20 CL0016