Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1119 ATGCGTTCCGATTTGGAGGAGTGCCGGGAGCACCTGCTAGTGGTAGATGTGAACGCTCAGAATAAGATCGAAAAGTCTTCCAAATTTCAGATTCGAAATCTCACTAAAGTCTCTGATGCCGGAGTTCCGATTCTCAAGGGCATCGACTTGGACGTCCCCGAGGGCGTGATACTCGGCGTCGTTGGACCCAGCGGTAGCGGCAAATCGATGCTTCTCAGGGCCTTGAACCGCCTCTGGGAACCTCCCTCTGGCACCGTCTTTCTCGATCATAACGATATCTGCGACCTCGATGTTCTCTCCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTTTTCGAAGGCACGGTAGCAGACAATGTGAGGTATGGACCACAAGTAAGAGGGAAGAAGCTAACTGATGAAGAAGTACGCAAGTTGCTGATAACAGCAGACCTTGATGCTTCTTTCATGAAGAAGAAGGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGTGTTGCACTTGCCAGGACATTAGCCAATTCCCCAGAGGTTTTACTGCTGGATGAGCCAACCAGTGCCCTAGATCCAATATCGACTGAGAACATAGAAGATGCTCTAATGAAGCTGAACAAGAACAGTGGTATGACTGTGATAATTGTGTCTCACAGCATCAAACAGATACAGAGGATAGCTGACTTGGTTTGCCTGCTTGTTGATGGTCAAGTTGTTGAAGTTCTGAACCCTGATCAGCTGTCTCAAGCCACGCATCCCATGGCCCAAAGGTTTCTTCAACTTAGCTCCTAG 792 0.4975 MRSDLEECREHLLVVDVNAQNKIEKSSKFQIRNLTKVSDAGVPILKGIDLDVPEGVILGVVGPSGSGKSMLLRALNRLWEPPSGTVFLDHNDICDLDVLSLRRKVGMLFQLPALFEGTVADNVRYGPQVRGKKLTDEEVRKLLITADLDASFMKKKGSELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNSGMTVIIVSHSIKQIQRIADLVCLLVDGQVVEVLNPDQLSQATHPMAQRFLQLSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1119 263 FunFam ABC transporter, ATP-binding protein 26 258 - -
Acco01g1119 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 1 262 IPR005670 GO:0005315|GO:0016020|GO:0035435
Acco01g1119 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 250 IPR027417 -
Acco01g1119 263 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Acco01g1119 263 Gene3D - 25 262 IPR027417 -
Acco01g1119 263 CDD ABC_PstB_phosphate_transporter 29 247 IPR005670 GO:0005315|GO:0016020|GO:0035435
Acco01g1119 263 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
Acco01g1119 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 260 IPR003439 GO:0005524
Acco01g1119 263 SMART AAA_5 54 245 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1119 Acco-ChrAcco01 16237288 16240260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1119 42 261 Calmodulin-binding Proteins AT2G36910 32.759 7.22e-31 119