Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1102 ATGAGAAAGAAGAGGCCCCCTCACCCTACATCAAGAGCCAATTCGGATTGGATAGTCCGATCGTTAGCTGGAGAGGCCTTCGGCTCGTTTAGAAGTGGTGTTCGTAGCTCGCCTTACTCCTCCATTCCCTCCACTCTACTTGCTTCGTCTTCTTCCTTCGTATCCTGTTTTCTGCCTCTTAAGATGGATGACTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGATGGTGAGTTCTACTATCGGAAGCGCAAAGAAAAACACACCCAAACCAGAGAGGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGATGATTATTCAAACAGAAAACGCAGAAAAGATCATAACTTATCTAAGAAGCCTGACCTCTCCAAGCCTGTGAATTTTGTCTCTACTGGATCTTTTATGCCTAATCAAGATGATAACCGTTCTAAAGAACAGATTGAAGAGGAAAAGTTTGCTCATGAGGATAGGCCAGGTTTAGGTCTTGGTATGGGAACTGCTAGCACTTCTGGTTCTGGGTTAGGTTTTAATACCAGTCATCGTGAAAATGCTTCTGATGATGATGATGATGATGATGATGGTTTTCTGCCTACGGCATTTGGAAAGAAGATTAAGGAGGGAGCAATGAGAAGGGAGAAGGAAAAGGAGAGAGCAAAATTGGAAAAGAGGAGAGCTCAGGGAAAAACTCAAGCTCAAGATGGCTTTTCAGATGTTGGGAAGTTTGAGAAGCATACAAAGGGGATTGGAATGAAGTTGTTGGAGAAGATGGGCTATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTAGCTCCTGTTGAGGCTCATTTGAGGGCTAAGAATACAGGCATTGGATTTAATGACTCAAAAGCAACAACTCCTTTGCCAAGTGTGCAAGTTGAGAAGACAGCATTGCCAGGAGTTGCTCAACCTACAGCTGTTGGGGCAAAGGAAAGGTTATGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGATGAGGATCATTATACTACAGCTGGAGAATTGTTATCAAGCAATCAAGAACAAGGTCTAGAGGTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACAAATTTGTCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGATGTCCCAATGCCAGAGCTTCAGCATAACGTGGGATTAATTGTTAGGTTGACTGAAGCAGACATCCAAGAGATTGATAGAAATTTGAGGAGAGAGAGGGAGACCGCACTTAGCTTGAAAAAAGAAAAAGAAAAGTTAGAAACTGAGGTAGCAAGTCAAAAGAAGCAGTTGGATGATTTGGAGGAAATAACAAGTGTGCTGGACCGAGTTGGAGAAGAGAACTCAATGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTACTGACCTGCGGAAAAGATTTGCTGATAGCTACAAGTTGTGTAACTTGTCATGCATTGCTTGCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCAAAATCCATTACATGGGTTAGAGTTGGTATCACTGTGGAAAGCATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCGCCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAGCCATGTTGGACAATATAGTCATGCCAAAATTGTCAAGTGCTGTTGATACATGGGAACCACATCGCGAGACTATTCCTATCCATACTTGGGTGCACCCATGGTTGCCTTTATTGGGACACAAATTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCACCTTGGAAGACTGTATTTGATTCAGTGAGTTGGGAACAACTCATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAGTGAACCCAGCAGATCAGAAACTTGATCAATTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAATTCACCTGATGGTTGATATAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCGAACTTTGAAGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAATGAAAGTATCCGATATCAGCTAAACTGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTAGTCCAGCCTGGCTTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCCGCAGCTCATGCTCAAGCCCAAGCTCCTTCAGGCTTAGGGGGTGCTGCCCATATGGATGGTGCAGCGGGTGTACATGAGTTGAGCTTAAAGGAAGTCGTTGAAGCCCATGCCCAACAACATGGTTTGCTATTCAAGCCTAAACCTGGAAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAATATTATAATAGATTCTCTAAATCAAAAGGTATATGTCCAAACCGAGGATGCATGGTCTTCGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAGTCGCTTGGTCGGAGACGATGA 2784 0.4267 MRKKRPPHPTSRANSDWIVRSLAGEAFGSFRSGVRSSPYSSIPSTLLASSSSFVSCFLPLKMDDYQEMERFGMDNDFEGGEWIDGEFYYRKRKEKHTQTREDVLYGVFADSDDDEDDYSNRKRRKDHNLSKKPDLSKPVNFVSTGSFMPNQDDNRSKEQIEEEKFAHEDRPGLGLGMGTASTSGSGLGFNTSHRENASDDDDDDDDGFLPTAFGKKIKEGAMRREKEKERAKLEKRRAQGKTQAQDGFSDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKATTPLPSVQVEKTALPGVAQPTAVGAKERLWSKQSRSKKKKDEDHYTTAGELLSSNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNVGLIVRLTEADIQEIDRNLRRERETALSLKKEKEKLETEVASQKKQLDDLEEITSVLDRVGEENSMGTLTLDLLAQCFTDLRKRFADSYKLCNLSCIACSYALPLFIRVFQGWDPLQNPLHGLELVSLWKALLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTAMLDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNCGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQAQAPSGLGGAAHMDGAAGVHELSLKEVVEAHAQQHGLLFKPKPGRMHNGHQIYGFGNVNIIIDSLNQKVYVQTEDAWSSESLQGLLELHNKSLGRRR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1102 927 Coils Coil 221 243 - -
Acco01g1102 927 MobiDBLite consensus disorder prediction 335 349 - -
Acco01g1102 927 MobiDBLite consensus disorder prediction 113 247 - -
Acco01g1102 927 MobiDBLite consensus disorder prediction 329 349 - -
Acco01g1102 927 Coils Coil 412 460 - -
Acco01g1102 927 ProSiteProfiles G-patch domain profile. 258 303 IPR000467 GO:0003676
Acco01g1102 927 MobiDBLite consensus disorder prediction 154 170 - -
Acco01g1102 927 MobiDBLite consensus disorder prediction 137 153 - -
Acco01g1102 927 MobiDBLite consensus disorder prediction 208 241 - -
Acco01g1102 927 SMART G-patch_5 256 301 IPR000467 GO:0003676
Acco01g1102 927 Pfam Tuftelin interacting protein N terminal 63 164 IPR022159 -
Acco01g1102 927 MobiDBLite consensus disorder prediction 115 133 - -
Acco01g1102 927 MobiDBLite consensus disorder prediction 178 193 - -
Acco01g1102 927 Pfam G-patch domain 258 299 IPR000467 GO:0003676
Acco01g1102 927 Pfam GC-rich sequence DNA-binding factor-like protein 479 745 IPR022783 -
Acco01g1102 927 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 62 914 IPR045211 GO:0000390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1102 Acco-ChrAcco01 15393417 15399235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1102 258 299 C2H2 Transcription Factor Family AT5G26610 47.619 3.28e-07 51.2