Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1091 ATGATGAACAGTCTGAAGAAGAAGAAGAGCAGTGATCTGATAGACGCCAAGCTGGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGTCCTGCTTGCGGACACAAGTTTCAATCCAAACCTGACTGGGTCGGTCTACCAGCCGGGGTTAAATTCGATCCAACAGACCAAGAACTGATTGAACACCTCGAAGCCAAAGTTGAATCCAAGCAGCACATGAAATCTCACCCTCTCATCGATGAGTTCATTCCCACCATTGAAGGCGAGGACGGAATCTGCTACACCCATCCCGAGAAACTCCCCGGAGTAACGAGGGATGGGTTGAGCAGGCACTTTTTTCACAGGCCATCGAAGGCGTACACGACGGGGACAAGGAAGAGAAGGAAGATCCAGAACGAGAGTGACAACTTACAACAAGAAGGAGGAGGAGGAGGAGAAACCAGATGGCACAAAACTGGGAAAACCAGGCCAGTTCTGGTGAATGGAAAGCAAAAAGGCTGCAAGAAAATCCTCGTACTCTACACCAACTTTGGTAAGAACAGAAAGCCTGAGAAGACCAATTGGGTTATGCATCAGTACCATTTGGGACAACATGAGGAAGAGAAAGAAGGCGAACTTGTTGTCTCCAAAATCTTCTTCCAGACACAGCCCAGACAATGCACCACAACCAACAACCCGAACAATATTGTTGTTAATACTAATAATAATAATACTAATTGGTCGGAGAGGAGCGCGACGACCGGAGAAGAAGCGAGCGGAGATCAGCCGAATAGTAATAGTAGAAGAGAGAGCACAAGTGGAAGTTGTTCTTCCAAAGAAATCTTCACTCATGACGTCTCTACTGTTGCTGTTGCTGTTCCTCCTCCTCCGCCATTAACGTCCTTCACTGCTTCTGCTTTGGATATTCATCATCAGCAACACCTCAAATCCGACCATTTCAGCTTCATTCCATTCAGGAAAAGCTTCGATGAGGTGGGAATTGCAGATGTTTCAAGAGGAATAGAAGTAGTGCAAGCTTCATCAGGTTCAACAGCAGAAGCAGTGAATCATCATCATCATCACCAACAACAGATTACAGCAAATTTTTCAGCATTTCATATGATCAATAGGCCTTCAATTCCTATTTCCACCATTATCTCTCCACCTCCTCCTTCACACCATCACACCTCCGTCATCCTTGATGATGTCACCAGATTAATGCTCCAAAATGATCATTTCCAGCAACAACATCATAAACTAGAAGGAAGGTCTGCTTCTGGCTTGGAGGAACTCATTATGGGATGCACTTCAACTAATTCCAAAGAGGAGTCATCTATCACACACTATCCACAAGAAGCAGAATGGTTGAAGTATTCTTCATACTGGCCTGATTCTGACAATCCAGGTCATCACCATCATGGTTAG 1401 0.4525 MMNSLKKKKSSDLIDAKLEEHQLCGSKQCPACGHKFQSKPDWVGLPAGVKFDPTDQELIEHLEAKVESKQHMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESDNLQQEGGGGGETRWHKTGKTRPVLVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCTTTNNPNNIVVNTNNNNTNWSERSATTGEEASGDQPNSNSRRESTSGSCSSKEIFTHDVSTVAVAVPPPPPLTSFTASALDIHHQQHLKSDHFSFIPFRKSFDEVGIADVSRGIEVVQASSGSTAEAVNHHHHHQQQITANFSAFHMINRPSIPISTIISPPPPSHHHTSVILDDVTRLMLQNDHFQQQHHKLEGRSASGLEELIMGCTSTNSKEESSITHYPQEAEWLKYSSYWPDSDNPGHHHHG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1091 466 Gene3D NAC domain 54 217 IPR036093 GO:0003677|GO:0006355
Acco01g1091 466 MobiDBLite consensus disorder prediction 222 270 - -
Acco01g1091 466 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 7 339 IPR044799 GO:0003700
Acco01g1091 466 FunFam NAC domain-containing protein 73 54 217 - -
Acco01g1091 466 SUPERFAMILY NAC domain 40 213 IPR036093 GO:0003677|GO:0006355
Acco01g1091 466 MobiDBLite consensus disorder prediction 118 151 - -
Acco01g1091 466 Pfam No apical meristem (NAM) protein 46 194 IPR003441 GO:0003677|GO:0006355
Acco01g1091 466 ProSiteProfiles NAC domain profile. 45 213 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1091 Acco-ChrAcco01 15053058 15056715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1091 7 454 NAC Transcription Factor Family AT5G56620 49.469 8.84e-132 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g1091 NAM 3.5e-23 No_clan