Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1090 ATGTCGTCTTTGTCAAAATCTGGCCATTATCTATTACTCTTCACTCTCTCTGACTCCTCCTTCGGAAATGCTTCGATTCACTCCCCGATTTGGTTCTTCAATTATCTGTTTGTTGATTATTTGTTTTGTCTCCGATCAGAACTGATTCTCGCCGATCACTCATCTGCGCTGATTATCGAGTCATTTCCGTGTGGGATGAAGATCGAGCAATTGGACGATATGGATTCGGATAGCTGTCGGAGCCAAGGGAATTACGAGAGGCAGATTGTGAGTGTTGATGCAAAGAGGGCCTTGGTTGGAGCAGGTGCCCGGATCTTGTTTTACCCGACGCTTTTGTATAATGTGCTTCGAAACAAGATTGAAACAGAGTTCCGGTGGTGGGATGAAGTCGATGAGTTTCTATTACTGGGAGCTGTTCCGTTCCCCAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTAAACGAACCTTATGAAACCTTGGTGCCTTCATCGTTATATCTTGCACATGGAATCGATCATTTGGTCATCCCTACTAGGGATTATCTCTTTGCCCCATCATTTTCAGATATAAGTCGAGCTGTGCAATTCATTCATCAGAACGCATCATGTGCCAAGACTACTTATGTTCACTGTAAAGCTGGGCGGGGCAGGAGTACAACAATTGTCCTTTGCTATTTGGTTGAATACAAGCATATGACACCTCTTACTGCCCTGGAATATGTACGGTCAAGAAGACCTAGAGTTCTATTAGCACCCTCGCAGTGGAAGGCTGTTCAGAATTATAGCATGCGCAGACCCTGTCCTAGGCCACACTCTCCCACAGGTGATGAAGTTCTTATAACCAAAGCTGATCTTGAGGGTTACCATAGCACATTCGATGCTAGTATGGAGTTGGCCATTGTTCCCAACGGGCCAAAGACAAAGTATAAGCCCATGATATCAAAGCTATCTTGCCTGTTTGCATCGTTAAAAGTTTCCCGTTATAGCATACCAGCAACCCGGCGGCTTCCTGTGTCTGAGGCACGTGCTTGCTAA 1053 0.4539 MSSLSKSGHYLLLFTLSDSSFGNASIHSPIWFFNYLFVDYLFCLRSELILADHSSALIIESFPCGMKIEQLDDMDSDSCRSQGNYERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYLAHGIDHLVIPTRDYLFAPSFSDISRAVQFIHQNASCAKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPLTALEYVRSRRPRVLLAPSQWKAVQNYSMRRPCPRPHSPTGDEVLITKADLEGYHSTFDASMELAIVPNGPKTKYKPMISKLSCLFASLKVSRYSIPATRRLPVSEARAC 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1090 350 ProSitePatterns Tyrosine specific protein phosphatases active site. 215 225 IPR016130 GO:0016311|GO:0016791
Acco01g1090 350 FunFam Dual specificity phosphatase domain protein 126 272 - -
Acco01g1090 350 Gene3D Protein tyrosine phosphatase superfamily 126 271 IPR029021 -
Acco01g1090 350 ProSiteProfiles Dual specificity protein phosphatase domain profile. 126 273 IPR020422 GO:0006470|GO:0008138
Acco01g1090 350 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 119 268 IPR029021 -
Acco01g1090 350 CDD PTPMT1 126 268 IPR044596 GO:0004721
Acco01g1090 350 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 194 262 IPR000387 GO:0016311|GO:0016791
Acco01g1090 350 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 66 328 - -
Acco01g1090 350 Pfam Dual specificity phosphatase, catalytic domain 170 267 IPR000340 GO:0008138|GO:0016311
Acco01g1090 350 SMART dsp_5 129 270 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1090 Acco-ChrAcco01 15039223 15041533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1090 69 330 Protein tyrosine phosphatase (PTP) family AT2G35680 51.495 1.06e-97 291