Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1087 ATGCAAGAAATCCAATCATACTTTATTCAGTCTAATGTCCCTCATTCCTTTGCTTGCCATATACATCACCCAATCAAAGACTTCATGGTGTGTGATTGGAAAAAGATGAAAAAGTCTTACGTTGATGAACATTTGATGTGCGACATCGACGGCCACGGCCAGCACCTTGCCGCCGCCGCTATCATCGGCCTTGACGGCTCCGTCTGGGCTCAGAGCCCTTCCTTCCCTCAGTTGAAGCCCAATGAGATCGAAGATATCACAAAAGATTTTGATGAACCAGGCCATCTTGCTCCCAAGGGCTTGCACATTGCGGGCACGAAGTACATGGTAATCCAGGGGGAGCCGGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGCATCACCATAAAGAAAACTGGACAAGCTCTAATTTTTGGTGTGTACGAGGAACCAGTGACTCCTGGACAGTGCAACATGATTGTGGAGAGGTTGGGAGATTACCTCGTTGATCAGGGTCTCTAG 504 0.4901 MQEIQSYFIQSNVPHSFACHIHHPIKDFMVCDWKKMKKSYVDEHLMCDIDGHGQHLAAAAIIGLDGSVWAQSPSFPQLKPNEIEDITKDFDEPGHLAPKGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALIFGVYEEPVTPGQCNMIVERLGDYLVDQGL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1087 167 Gene3D Dynein light chain 2a, cytoplasmic 37 167 - -
Acco01g1087 167 PRINTS Plant profilin signature 88 102 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Plant profilin signature 120 135 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Plant profilin signature 153 166 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Plant profilin signature 63 76 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Plant profilin signature 140 153 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Plant profilin signature 35 48 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Plant profilin signature 107 116 IPR005455 GO:0003779
Acco01g1087 167 SUPERFAMILY Profilin (actin-binding protein) 39 166 IPR036140 -
Acco01g1087 167 Pfam Profilin 38 166 IPR005455 GO:0003779
Acco01g1087 167 CDD PROF 38 166 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Profilin signature 100 114 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Profilin signature 136 149 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Profilin signature 76 96 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Profilin signature 37 46 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Profilin signature 149 166 IPR005455 GO:0003779
Acco01g1087 167 PRINTS Profilin signature 57 66 IPR005455 GO:0003779
Acco01g1087 167 FunFam Profilin 35 167 - -
Acco01g1087 167 SMART prof_2 39 167 IPR005455 GO:0003779
Acco01g1087 167 PANTHER PROFILIN 38 166 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1087 Acco-ChrAcco01 14992578 14995617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1087 38 167 Cytoskeleton Gene Families AT4G29340 77.863 7.40e-74 216