Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1086 ATGCTGGTTCGATTGGAGAAGATGGGTTCAATTGACAATTGTGTTGCAAAACGCCTTGGAGATGGATTTTCAAAGGCTCAGCGACACAAGCAGAAGAAGACAGAGCAAGCACCGATTTCCAGAGCCAACGAAAAGCGCCGAACTCGCGAGAACTCAACCCTCCAGAAGAAGATGTCGTGGCAAACCTACGTCGATGACCACCTCATGTGCGAGATCGAAGGTAATCATCTCAGTTCTGCTGCTATCCTTGGTCAAGATGGCAGCGTTTGGGCTCAGAGCGCCACTTTCCCTCAGTTGAAGCCTGAGGAAATCACTGCTATCATGAATGACTTTGCGGAACCTGGATCACTTGCTCCTACCGGATTATATCTTGGTGGCACTAAATATATGGTGATTCAAGGTGAATCAGGAGCAGTCATTCGAGGGAAGAAGGGTCCTGGCGGGGTTACTATCAAGAAGACCACCCAAGCCCTAATCATTGGGATTTATGATGAACCAATGGCTCCTGGTCAGTGCAACATGATAGTGGAAAGGCTTGGTGATTACCTCATTGATCAGGGTCTTTAA 567 0.4797 MLVRLEKMGSIDNCVAKRLGDGFSKAQRHKQKKTEQAPISRANEKRRTRENSTLQKKMSWQTYVDDHLMCEIEGNHLSSAAILGQDGSVWAQSATFPQLKPEEITAIMNDFAEPGSLAPTGLYLGGTKYMVIQGESGAVIRGKKGPGGVTIKKTTQALIIGIYDEPMAPGQCNMIVERLGDYLIDQGL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1086 188 MobiDBLite consensus disorder prediction 23 54 - -
Acco01g1086 188 FunFam Profilin 58 188 - -
Acco01g1086 188 CDD PROF 59 187 IPR005455 GO:0003779
Acco01g1086 188 Gene3D Dynein light chain 2a, cytoplasmic 56 188 - -
Acco01g1086 188 SMART prof_2 58 188 IPR005455 GO:0003779
Acco01g1086 188 Pfam Profilin 58 187 IPR005455 GO:0003779
Acco01g1086 188 MobiDBLite consensus disorder prediction 23 53 - -
Acco01g1086 188 PRINTS Profilin signature 60 69 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Profilin signature 78 87 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Profilin signature 157 170 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Profilin signature 97 117 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Profilin signature 170 187 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Profilin signature 121 135 IPR005455 GO:0003779
Acco01g1086 188 PANTHER PROFILIN 58 187 IPR005455 GO:0003779
Acco01g1086 188 SUPERFAMILY Profilin (actin-binding protein) 59 187 IPR036140 -
Acco01g1086 188 PRINTS Plant profilin signature 161 174 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Plant profilin signature 84 97 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Plant profilin signature 174 187 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Plant profilin signature 58 71 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Plant profilin signature 128 137 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Plant profilin signature 141 156 IPR005455 GO:0003779
Acco01g1086 188 PRINTS Plant profilin signature 109 123 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1086 Acco-ChrAcco01 14967639 14970359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1086 58 188 Cytoskeleton Gene Families AT4G29350 79.389 5.43e-79 229