Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1076 ATGGGAAGAGCCACAAGGTGGTTGAAGGGGTTGTTTGGGATGAAGAAAGACAGAGACAAAAAACAGAATTCAAACTCCGACCACCGTGGCAACTTAAAATCTGCGGCGTCGCGGTCGGCGGCACCACCACCCAATGATCTTTCACCTGCAGAGGCTGCTTGGCTTCAATCATTCTACGGAGAAACAGACAACCAGCAGAACAAGCACGCCATTGCGGTTGCCGCAGCCACCGCCGCAGCAGCCGACGCCGCCATGGCTGCCGCCCAGGCGGCAGTGGCCGTAGTGAGGCTGACCAGTCACAGCCAAACCACCAACATGTTCGGCCGTGGATACGAGAAATTGGCGGCCGTCAAGATTCAAACATTATTCAGGGGATTCTTGGCAAGGAAGGCATTAAGAGCCCTGAAAGGATTAGTGAAGATTCAAGCACTGGTGAGAGGATTTCTAGTTCGAAAGCAAGCAACTGCAACACTACACAGCATGCAAGCTCTGATTAGAGCTCAAGCCACGGTTCGATCTCATAAAGCTCGTCAAGTCATGAACAAAAACGAAGAATCATACAAATTTGAAACTCAACCTCGAAGATCCACGAAGAGATTCGAAGAAAGGAGGAGATTATCTTCTTCCTTCGACGTTTCCATGTATAACAACAGTAACAGTACCGATGGGAGTCCGACACCGAAGATAGTGGAGGTGGACACAGGCGGCTGCCGGCCGAAGTCAAGGTCTCGCCGGAGCAACACATCAATGTCAGATTTTGGCGACGACCCATTATTTCAAGTAATGTCTTCTCCACTCCCAGTCCCACAAATTCGAACCCCAGCTCGGACATCAACGGCGGCAGATCGGAGGGTTTTGCCGGACTCAGAGTGGGGACTAACAGGGGAAGAATATAAGTTCTCTACAGCACAGAGCACTCCACGTTTCACCAATTCATGTTCATGTGGATCACTCGCCGCCACACCCAAGAGTGTCTGTGCACAGAGATTGGTATGGCAATATGGAAACTATCCTAATTACATGGCGAATACTCAGTCTTCGAAGGCAAAACTGAGGTCTCGCAGTGCTCCGAAGCAGCGGCCGGAGTCCTCCGGTGGCGGGGCGAAGAAGAGGCTCTCGTTGAATGAAGTGATGGAGTCTAGGAGTAGTTTGAGTGGGATTAGGATGCAGAGGACTTGTTCGAAAGTTCAGGAAGCCATTAATTTCAAGAATGCTGTGATGGGGAAGATTGAGAAATCTGGGGAGATTGGGAGAGATAGTTACTACTTGCAGAGGAGGTGGTATGGTGAATGA 1293 0.5043 MGRATRWLKGLFGMKKDRDKKQNSNSDHRGNLKSAASRSAAPPPNDLSPAEAAWLQSFYGETDNQQNKHAIAVAAATAAAADAAMAAAQAAVAVVRLTSHSQTTNMFGRGYEKLAAVKIQTLFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLHSMQALIRAQATVRSHKARQVMNKNEESYKFETQPRRSTKRFEERRRLSSSFDVSMYNNSNSTDGSPTPKIVEVDTGGCRPKSRSRRSNTSMSDFGDDPLFQVMSSPLPVPQIRTPARTSTAADRRVLPDSEWGLTGEEYKFSTAQSTPRFTNSCSCGSLAATPKSVCAQRLVWQYGNYPNYMANTQSSKAKLRSRSAPKQRPESSGGGAKKRLSLNEVMESRSSLSGIRMQRTCSKVQEAINFKNAVMGKIEKSGEIGRDSYYLQRRWYGE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1076 430 MobiDBLite consensus disorder prediction 209 227 - -
Acco01g1076 430 MobiDBLite consensus disorder prediction 10 27 - -
Acco01g1076 430 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Acco01g1076 430 MobiDBLite consensus disorder prediction 179 208 - -
Acco01g1076 430 ProSiteProfiles IQ motif profile. 160 188 IPR000048 GO:0005515
Acco01g1076 430 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Acco01g1076 430 MobiDBLite consensus disorder prediction 345 374 - -
Acco01g1076 430 Gene3D - 136 186 - -
Acco01g1076 430 Pfam Protein of unknown function (DUF4005) 306 394 IPR025064 -
Acco01g1076 430 MobiDBLite consensus disorder prediction 179 256 - -
Acco01g1076 430 SMART iq_5 111 133 IPR000048 GO:0005515
Acco01g1076 430 SMART iq_5 134 155 IPR000048 GO:0005515
Acco01g1076 430 MobiDBLite consensus disorder prediction 9 46 - -
Acco01g1076 430 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Acco01g1076 430 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Acco01g1076 430 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1076 Acco-ChrAcco01 14716249 14717710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1076 1 389 IQD Protein Family AT3G16490 47.761 3.47e-85 264