Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1072 ATGAGAAATCCAACTCCATTGTTCTTCTTCTTCTTCCTTCTCTTCCTGAGCTGCGTGAATTCTCAGTCTGAACTTTATGCTCAAGAACATGAAGTTTTGCTGAGGATGAAACAGTACTATAACAACCCATCTTCTCTCAGTCACTGGACAAATTCATCATCTCATTGTTCATGGTCTGAGATTAAGTGCACCAATAACTCTGTTACAAGGCTGGCTCTGATCAACATCAATATAAGCCAACCGATTCCAACTTTCATTTGTGAGCTCAAGAATCTCAGTTCTATTGATTTTCAATGGAACTACATTCCTCTGGAGTTCCCGACGTATCTCTACAATTGCTCCAAGCTGGAGTACTTGGACCTCTCTAATAATTACTTCGTTGGTAAGGTTCCAGATGACATCGACCGATTGGCCGGCCTGCGTTTTCTTAACCTCGGCGGTAACAACTTCTCCGGTGAGATTCCGGTGAGTGTCACCAAGTTAAAAGAGCTCACAAGTCTTAAGCTTCATTATTGTCTCTTCAATGGCACTATCCCAAGTGAAATAGGCAACTTATCCAATCTTGAAGTCTTAAATTTGGGCTTCAACCTATTCTCACCTTCACAGTTTCCTTCTAGCTTCATGAAGCTCACGAAATTGAAGGATTTGGGGATGTCTTCCTGCAACTTGACCGGTGAAATCCCCGAAAGCATCGGGCAACTGGCGGGCTTAGAGACATTGGATTTGTCCATGAATCAGTTGAGTGGCAAAATTCCAAGTAGTTTGTTTATGCTGAAGAATCTGAGCATTATGTTTCTTTCGAGGAATCAGCTTAATGGTGAGCTACCTCAAGTGATTGAAGCTTTAAACTTGACCATCGTTGATCTTGCTCAGAACAAGCTTACAGGGAACATGCCAAATGGCTTTGGGAATCTCCAGAAGCTAACTGGTTTGAACCTTGGTCTTAATCAATTATCAGGCGAGATTCCAGAAAGCTTAGGCCGTCTTCAATCTATAATAGATTTTGGTATCTTCTTCAACAATTTATCAGGCAATGTTCCTCCAGAGTTTGGGCTCCATTCAAATCTTAGAAGATTTGAGATTGCTTCGAACAATTTCACAGGTAGTCTTCCTCAGAACTTGTGTTACCATGGAAATTTATTTAGATTAACAGCTTATGACAATAAACTCAGTGGAAAATTACCAGAATCACTTGGAAATTGTAGCAGCTTACTAGAGTTGAAAGTCTACAATAATGAACTCTCTGGTGAAATTCCTACTAGCCTTTGGGCGTCTAAGAATTTGTCGCTTTTTATGATCAATGACAATAAGTTCATAGGTGAGCTTCCTGAAAAATTGCCTGTGAATGTTTCACTCATGACAATTAGTTACAATCAGTTTTCTGGTAGAATCCCAGCAGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAATGCAAGTAGAAACCTCTTTAATGGAAGTATCCCACAAGAGCTAACCAGTCTTTCTCAGCTAGCAACTTTGTTGCTTGATCAGAACAAACTTTCTGGGCCACTTCCATCTAAGATTATATCGTGGGAATCTCTGAGAACTCTAAACTTGAGCCACAATCAACTCTCGGGTGAAATTCCAGATTCTATTGGTCATTTACTTGACCTTGCTCAACTAGATTTGTCAGAAAATCAACTCTTTGGCCAAATTCCATCTCAACTAGGCCTTTCGAGACCCTCTGTTCTCAACTTTTCCTCTAATCATTTGACTGGGAAGATTCCCAGTGAATTGGATAATCTTGCTTATGCCTCCAGCTTTTTGAACAATTCTGGTCTTTGTACTGATACAGGTGGGTCACCCCTTAAATTGTGCAATTCTGGTTCTGTCCCTCAAAGTTCAAGCAAACGCTCATCTGTCTCTGTTGGGTTGATCATAGGCCTTGCTGTAGTAGCCTGCATAGCAGTTTTCCTGTTATCACTTTTGATGATGAAATTCTACCAAAGGAGAAATCAAGAACTGGACTCTTCATGGAAGTTAACCTCTTTTCAAAAGCTCAGTTTCACAGAATCAAACATCGTCTCATCCATGACGGATTATAACATCATCGGCAGTGGAGGGTACGGTACAGTGTACCGTATCGCCATCAATGACGATGTCGGCTATGTTGCAGTGAAGAAGATAAGCAACAATAGGAAGTTGGATCAGAAACTTGAGAATGCATTTATTGCGGAAGTTAAAATCTTGAGCACAATTCGTCACATTAACATAGTGAAGTTGCTATGTTGTGTGTCTAATGAGGATTCTCTGCTTCTTGTTTATGAGTATATGGAAAATCACAGTCTTGATAAGTGGCTACACAAGAAGATTAGTAATGGCTCTTCAGGTGGGTTATCATCTTTTACAGTTGATAGTGTTTTTCTTGATTGGCCAAAGAGAGTGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCATGACAGCTCACCGCCGATTATTCATCGCGATGTCAAAGCAAGCAATATCCTTTTGGATTCTCAATTCAATGCAAAAGTTGCAGATTTTGGTCTTGCAAGGATGCTGATCAAACAAGGAGAACAAGATACCATGTCAGCTGTTGTTGGCTCTTTTGGCTACATTGCTCCAGAATATGCTCAAACGAAAAGAGTGAACGAAAAGGTTGATGTATTTGGTTTTGGAGTGATCCTGCTTGAGCTGGCAACAGGAAAAGAAGCCAACTATGGAGATGAACACTCGTCTCTCGCAGAATGGGCATGGCGTCAGACTCGATTAGGAAGCAACATAGAACAAGTTCTAGACAAAGATGTTAAGGAAACATTGTACTTGTCGGAAATGTCCAGCGTCTTCAAGCTTGGGGTGATGTGTACAAGCAAAGAGCCAGCTAGTAGACCTTCCATGAAAGAGGCTCTGAATATATTGCTGCGCATGAGAGAACCAATTGGTTATGTAGAAATGAATTTTGGTCATTTTGAGGTTGTTCCTCTACTAAAGAATTCTAAAAGGGAGAGTAGGTTAGATATTGATGATAATGATAGCTAA 3036 0.4051 MRNPTPLFFFFFLLFLSCVNSQSELYAQEHEVLLRMKQYYNNPSSLSHWTNSSSHCSWSEIKCTNNSVTRLALININISQPIPTFICELKNLSSIDFQWNYIPLEFPTYLYNCSKLEYLDLSNNYFVGKVPDDIDRLAGLRFLNLGGNNFSGEIPVSVTKLKELTSLKLHYCLFNGTIPSEIGNLSNLEVLNLGFNLFSPSQFPSSFMKLTKLKDLGMSSCNLTGEIPESIGQLAGLETLDLSMNQLSGKIPSSLFMLKNLSIMFLSRNQLNGELPQVIEALNLTIVDLAQNKLTGNMPNGFGNLQKLTGLNLGLNQLSGEIPESLGRLQSIIDFGIFFNNLSGNVPPEFGLHSNLRRFEIASNNFTGSLPQNLCYHGNLFRLTAYDNKLSGKLPESLGNCSSLLELKVYNNELSGEIPTSLWASKNLSLFMINDNKFIGELPEKLPVNVSLMTISYNQFSGRIPAGISSMKNLVVFNASRNLFNGSIPQELTSLSQLATLLLDQNKLSGPLPSKIISWESLRTLNLSHNQLSGEIPDSIGHLLDLAQLDLSENQLFGQIPSQLGLSRPSVLNFSSNHLTGKIPSELDNLAYASSFLNNSGLCTDTGGSPLKLCNSGSVPQSSSKRSSVSVGLIIGLAVVACIAVFLLSLLMMKFYQRRNQELDSSWKLTSFQKLSFTESNIVSSMTDYNIIGSGGYGTVYRIAINDDVGYVAVKKISNNRKLDQKLENAFIAEVKILSTIRHINIVKLLCCVSNEDSLLLVYEYMENHSLDKWLHKKISNGSSGGLSSFTVDSVFLDWPKRVQIAIGIAQGLSYMHHDSSPPIIHRDVKASNILLDSQFNAKVADFGLARMLIKQGEQDTMSAVVGSFGYIAPEYAQTKRVNEKVDVFGFGVILLELATGKEANYGDEHSSLAEWAWRQTRLGSNIEQVLDKDVKETLYLSEMSSVFKLGVMCTSKEPASRPSMKEALNILLRMREPIGYVEMNFGHFEVVPLLKNSKRESRLDIDDNDS 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1072 1011 FunFam Receptor-like protein kinase HSL1 666 765 - -
Acco01g1072 1011 Gene3D Ribonuclease Inhibitor 345 620 IPR032675 -
Acco01g1072 1011 Gene3D Ribonuclease Inhibitor 28 135 IPR032675 -
Acco01g1072 1011 Gene3D Ribonuclease Inhibitor 204 253 IPR032675 -
Acco01g1072 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Acco01g1072 1011 ProSiteProfiles Protein kinase domain profile. 686 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1072 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 275 - -
Acco01g1072 1011 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 450 617 - -
Acco01g1072 1011 SMART serkin_6 686 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1072 1011 Pfam Leucine rich repeat 107 150 IPR001611 GO:0005515
Acco01g1072 1011 FunFam Kinase family with leucine-rich repeat domain-containing protein 766 984 - -
Acco01g1072 1011 Gene3D Transferase(Phosphotransferase) domain 1 766 982 - -
Acco01g1072 1011 ProSitePatterns Protein kinases ATP-binding region signature. 692 716 IPR017441 GO:0005524
Acco01g1072 1011 Pfam Protein kinase domain 688 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1072 1011 Gene3D Ribonuclease Inhibitor 254 344 IPR032675 -
Acco01g1072 1011 SUPERFAMILY Protein kinase-like (PK-like) 685 981 IPR011009 -
Acco01g1072 1011 ProSiteProfiles Leucine-rich repeat profile. 236 258 IPR001611 GO:0005515
Acco01g1072 1011 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 277 449 - -
Acco01g1072 1011 SMART LRR_typ_2 519 543 IPR003591 -
Acco01g1072 1011 SMART LRR_typ_2 185 209 IPR003591 -
Acco01g1072 1011 SMART LRR_typ_2 305 329 IPR003591 -
Acco01g1072 1011 SMART LRR_typ_2 234 258 IPR003591 -
Acco01g1072 1011 SMART LRR_typ_2 137 161 IPR003591 -
Acco01g1072 1011 Gene3D Phosphorylase Kinase; domain 1 662 765 - -
Acco01g1072 1011 SUPERFAMILY RNI-like 60 343 - -
Acco01g1072 1011 Pfam Leucine Rich Repeat 521 543 IPR001611 GO:0005515
Acco01g1072 1011 PANTHER UNNAMED PRODUCT 204 904 - -
Acco01g1072 1011 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Acco01g1072 1011 FunFam Receptor-like protein kinase HSL1 isoform A 26 176 - -
Acco01g1072 1011 SUPERFAMILY L domain-like 255 590 - -
Acco01g1072 1011 Gene3D Ribonuclease Inhibitor 136 203 IPR032675 -
Acco01g1072 1011 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Acco01g1072 1011 ProSiteProfiles Leucine-rich repeat profile. 521 543 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1072 Acco-ChrAcco01 14590115 14593580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1072 29 1010 Receptor kinase-like Gene Family AT5G25930 48.430 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g1072 Pkinase 2.9e-51 CL0016