Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1054 ATGGCTGAGCCACTTCTAGGCCCAGAGACTGGCACTTCCACCAACTGCTCTTCTTCTTCTCCTTCTCCATCTTCGTCTTCCTCTTCCTCTTCGTCCTTGTCTTCTTCTTCTGCTCAAAAGAAGCAGCTGAAGCGAGCCAGAGAAGAAGATAGTAATAGCAAGCACTCTGTTTATAGAGGGGTCCGAATGCGAACGTGGGGCAAATGGGTGTCTGAAATCCGTGAACCCAGGAAGAAAAATCGGATCTGGCTCGGAACTTTCGCCACTGCCGAGATGGCCGCCCGTGCCCACGATGTCGCTGCCCTTAGCATTAAAGGCACATCTGCCATTCTTAACTTCCCTGAGCTCGCCGATTCTCTGCCCCGACCCGCATCCAAATCGCCCCGAGACGTCCAGGCCGCCGCCGCCAAAGCCGCTTCCATGGAGATACTCACCACCAACAATCCCATTCCCACACCCACAACATCATCTTCTTCTTCTTCCTCTGCTGAAGATGTTTCCACACCAGAGGAACTAGGAGAGATAGTGGAGCTTCCATCACTGGGTACAAGCTTCCAAGAAACCGACCCAAATAACAATTTTGTGTTTTTTGACCTGGTAGATGGGTGGTCCTATCCTCACCCATGGTATCATAGTCTTTACGATGATGAGAACAAGTACGGTGGTGGTGGCTATTTCACTATGGATCGCACATCATCACTACATGAAGAAGAAACAGAGGGTTTGATTCTTTGTGGCTTTGAAGGCTCGTTGTGGCAACATTAG 765 0.5033 MAEPLLGPETGTSTNCSSSSPSPSSSSSSSSSLSSSSAQKKQLKRAREEDSNSKHSVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALSIKGTSAILNFPELADSLPRPASKSPRDVQAAAAKAASMEILTTNNPIPTPTTSSSSSSSAEDVSTPEELGEIVELPSLGTSFQETDPNNNFVFFDLVDGWSYPHPWYHSLYDDENKYGGGGYFTMDRTSSLHEEETEGLILCGFEGSLWQH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1054 254 SUPERFAMILY DNA-binding domain 56 115 IPR016177 GO:0003677
Acco01g1054 254 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Acco01g1054 254 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Acco01g1054 254 FunFam Ethylene-responsive transcription factor 2 56 115 - -
Acco01g1054 254 CDD AP2 56 116 IPR001471 GO:0003700|GO:0006355
Acco01g1054 254 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Acco01g1054 254 MobiDBLite consensus disorder prediction 8 40 - -
Acco01g1054 254 MobiDBLite consensus disorder prediction 1 56 - -
Acco01g1054 254 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Acco01g1054 254 MobiDBLite consensus disorder prediction 41 56 - -
Acco01g1054 254 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Acco01g1054 254 MobiDBLite consensus disorder prediction 142 167 - -
Acco01g1054 254 MobiDBLite consensus disorder prediction 142 170 - -
Acco01g1054 254 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Acco01g1054 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1054 Acco-ChrAcco01 14181941 14182705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1054 23 223 AP2-EREBP Transcription Factor Family AT5G11590 58.294 4.12e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g1054 AP2 2.2e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g1054 01 14181941 14182705 Acco01g1054 01 14181941 14182705 ECH