Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco01g1040 | ATGGAACGGATCGTCGGCGGCAAGTACAAGCTCGGCCGCAAGATAGGGAGTGGATCCTTCGGCGAAATTTACCTCGCTACTCATATCGATACTATTGAGATAGTCGCGATTAAAATTGAGAACACTCAAACTAAGCACCCACAACTGCTTTATGAGGCAAAACTGTATCATATTCTTCAAGGAGGAAGTGGAATTCCCAGCATAAGGTGGTCTGGTGTAGACGGGGAGGACAATGTGCTAGTTATTGATTTGCTGGGACCCAGTCTTGAAGATCTGTTTGTGTATTGTGGAAGAAAGTTTTCGTTGAAGACTGTATTAATGTTGGCTGATCAGATGATCACCAGAATAGAATATGTTCATTCTAAGGGATTTCTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCATAAAGCGAATCAGGTTTACATAATTGACTTTGGGCTTGCAAAACGATATCGGGACCCCACAACTAATCGTCATATTCCTTACCGGGAGAACAAAAACTTAACTGGCACTGCACGTTATGCAAGCTGTAATACTCATCTTGGTATTGAGCAAAGCCGCCGGGATGATTTGGAGTCACTAGGATATGTGCTTTTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATACGTGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAGGCAAATCTCATCCTGTAGAGTTTGCTTCGTACTTTCATTATTGCCACTCTTTGACATTTGACCAGCGACCTGATTATGGATTTTTGAAGCGTCTATTCCGGGACCTATTTGCTCGACAAGGTTTTGAATTTGATTATGTATTTGATTGGACCATTTTAAAGTACCAGCAGACACAAAAGATTAAAGTTAAGCCTCAAACATCTCCAGCTCCTGGAGCAAGCAACAGTCATCCAATGCCAACAGGTGTTTATGCTTATTCAGGGGATGTCTCAGAGCACATTAGATCTGGAAATGCTATTGGTTCTGGTGTTAAGATGCAGTTTAAATCACCAGCAGGAAAAAATACAGGTGTTAGTAATCCTCTTGACAAGAATGTTTTTGAAGAAGCAAATATGCCTTCTACTTCATATTCACATGCTGGTACCTCAAAAAGGAACTCCTTGAAGCCTGCCTTGACTCCTGAAGCTGCAAACCCTGGTCGTGGCCGAGGCAGTAAAATTGGTCCTTCAAGTAGCTGGATTTCGTCTCTGCAGCAAAATTGGTCCTTCAAGTAG | 1275 | 0.418 | MERIVGGKYKLGRKIGSGSFGEIYLATHIDTIEIVAIKIENTQTKHPQLLYEAKLYHILQGGSGIPSIRWSGVDGEDNVLVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGHKANQVYIIDFGLAKRYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIREKKVSTPIEVLGKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFARQGFEFDYVFDWTILKYQQTQKIKVKPQTSPAPGASNSHPMPTGVYAYSGDVSEHIRSGNAIGSGVKMQFKSPAGKNTGVSNPLDKNVFEEANMPSTSYSHAGTSKRNSLKPALTPEAANPGRGRGSKIGPSSSWISSLQQNWSFK | 424 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco01g1040 | 424 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - | |
Acco01g1040 | 424 | MobiDBLite | consensus disorder prediction | 373 | 424 | - | - | |
Acco01g1040 | 424 | MobiDBLite | consensus disorder prediction | 373 | 389 | - | - | |
Acco01g1040 | 424 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 290 | IPR011009 | - | |
Acco01g1040 | 424 | FunFam | Casein kinase I isoform delta-like | 1 | 339 | - | - | |
Acco01g1040 | 424 | SMART | serkin_6 | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Acco01g1040 | 424 | PANTHER | CASEIN KINASE-RELATED | 7 | 348 | - | - | |
Acco01g1040 | 424 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Acco01g1040 | 424 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 319 | - | - | |
Acco01g1040 | 424 | ProSiteProfiles | Protein kinase domain profile. | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Acco01g1040 | 424 | MobiDBLite | consensus disorder prediction | 408 | 424 | - | - | |
Acco01g1040 | 424 | Pfam | Protein kinase domain | 9 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Acco01g1040 | 424 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco01g1040 | Acco-ChrAcco01 | 13850973 | 13854824 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco01g1040 | 9 | 215 | EF-hand Containing Proteins | AT4G23650 | 29.577 | 1.01e-14 | 73.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Acco01g1040 | Pkinase | 2.3e-27 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco01g1040 | 01 | 13850973 | 13854824 | Acco01g1040 | 01 | 13850973 | 13854824 | ECH |