Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1034 ATGTGTCGTGCAAATTGTGAGGTTGAGTCTAGGAGATCAGCAGCAATGGCTCCAAAAAGAGGTGGAAAAGCTCCCGTCGCGGCTACTAAGAAGAAGCAGGACAAGGTGGTGAACCCGCTATTTGAAAAGCGTCCGAAGCAGTTTGGGATCGGAGGTGCATTGCCTCCTAAGAGAGACCTGACACGATTCGTCAAGTGGCCCAAGACTGTTCAAATCCAGAGGAAGAAGAGGATTCTCAAGCAAAGGTTGAAGGTCCCTCCAGCTTTGAATCAGTTCACTAAAACACTAGATAAGAACCTTGCAACTAGCCTATTCAAGATGCTCCTCAAGTATAGGCCTGAGGATAAGGCTGAAAAGAAAGAACGACTCTTGAAGAGGGCTCAAGCCGAGGCAGAAGGACAATCTACAGAAGCTAAGAAGCCTATTGTTGTGAAATACGGTCTCAATCATGTGACCTACCTGATCGAGCAGAATAAGGCACAGCTAGTTGTGATTGCACATGATGTAGATCCAATTGAACTGGTTGTCTGGCTGCCAGCATTGTGCAGAAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCGCGCTTGGGAACGATTGTTCATAAGAAAACTGCATCAGTTCTGTGTTTGACAACTGTCAAGAATGAAGACAAATTTGAATTCTCCAAGATTCTAGAGGCAATCAAGGCTAACTTCAATGACAAGTACGATGAGTACAGAAAGAAGTGGGGCGGTGGGATTATGGGATCTAAATCCCAAGCCAGGACCAAGGCCAAGGAAAGGCTTCTTGCCAAGGAAGCGGCACAGAGAATGTCTTGA 825 0.463 MCRANCEVESRRSAAMAPKRGGKAPVAATKKKQDKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGQSTEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKFEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1034 274 FunFam 60S ribosomal protein L7a 66 249 - -
Acco01g1034 274 Coils Coil 117 137 - -
Acco01g1034 274 ProSitePatterns Ribosomal protein L7Ae signature. 182 199 IPR004037 GO:0042254|GO:1990904
Acco01g1034 274 SUPERFAMILY L30e-like 104 245 IPR029064 -
Acco01g1034 274 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 134 220 IPR004038 -
Acco01g1034 274 PRINTS Ribosomal protein L7A/RS6 family signature 189 203 IPR018492 -
Acco01g1034 274 PRINTS Ribosomal protein L7A/RS6 family signature 144 158 IPR018492 -
Acco01g1034 274 PRINTS Ribosomal protein L7A/RS6 family signature 179 189 IPR018492 -
Acco01g1034 274 PRINTS Ribosomal protein L7A/RS6 family signature 163 176 IPR018492 -
Acco01g1034 274 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 58 250 - -
Acco01g1034 274 Gene3D - 66 249 IPR029064 -
Acco01g1034 274 MobiDBLite consensus disorder prediction 9 31 - -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 82 101 IPR001921 -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 140 160 IPR001921 -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 233 253 IPR001921 -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 45 62 IPR001921 -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 106 119 IPR001921 -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 201 225 IPR001921 -
Acco01g1034 274 PRINTS Ribosomal protein L7A family signature 62 79 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1034 Acco-ChrAcco01 13756866 13760408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1034 16 274 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 84.170 1.04e-165 457