Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1026 ATGAATAGAAGCGGCGTCGTCGAGAGCTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATAAACCATACCATGAGGCCTCCTAATCATCAACCTTCACATCCAAATAATTCTTCTCCTCCTTTCTTCTTCTCATCATCATCTTCCACTCCTAATTCTTCCACTAATAACTTCCTCTCTCCATATCCTCCTTTCTCTAATTCTCTTCCGTTTCCTTCTACTTGGCATGCAAATCAAGATCATCAGCTTCCTGTCTCCTGGAACCAACTTCTCATGGGCGAAGAAGATAAGAAAATGGGGAACTGGGAGCAGCAAGTGTTGATGAGTCAGGCTCAAAATGTTGGTCTTGTGGATGTGAAGCAAGAGAGTTCATCGGTGGACAGCTATGTGTATGGAGGAGGACATGTCGGTGCGGCTGGCGGCAGAGTAAATAACAGGAACGAAGAGTTTCAGGCAGCGGCCTCCAGCGGCGGCCGAGGCGGTGCTAATTGGTCTCATCACCAACATCAGATAGTGCCTCTTTCTGCTGGTGCTTCTTCACCAAAATCCTGTGTGACAAGTTTCAGCAGCAACATGTTGGATTTCTCTAGCAGTAAGACAGATTCTAGGCATCCTCCTCCTGATCGATCTTCTGAGTGTAACAGCAATGGAGGTAGCGGGGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACGACACAGTCTAGCAGCTTCAAGGTTAGAAAAGAGAAATTAGGTGATAGAATTACTGCCCTTCATCAGTTAGTTTCCCCCTTCGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCACCACTGGATCATCATCATCAAACATCAGGCACCAACACTTTGTTCAAGAAGAGAAGAATTGTATATTCCGTGAAGACCCTGGTCAGGAATTAGAGGAAGAACCAAAGAAGGATCTGAAGAGTAAAGGGTTGTGTTTGGTTCCAGTTTCATGCACTCTTCAAGTTGGGAGTGATAATGGAGCTGATTACTGGGCTCCTGCTCTTGGAGGAGGCTTTTGA 1107 0.4634 MNRSGVVESSPVQQMMAAGNPNWWNINHTMRPPNHQPSHPNNSSPPFFFSSSSSTPNSSTNNFLSPYPPFSNSLPFPSTWHANQDHQLPVSWNQLLMGEEDKKMGNWEQQVLMSQAQNVGLVDVKQESSSVDSYVYGGGHVGAAGGRVNNRNEEFQAAASSGGRGGANWSHHQHQIVPLSAGASSPKSCVTSFSSNMLDFSSSKTDSRHPPPDRSSECNSNGGSGAVKKARVQPSTTTQSSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTTGSSSSNIRHQHFVQEEKNCIFREDPGQELEEEPKKDLKSKGLCLVPVSCTLQVGSDNGADYWAPALGGGF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1026 368 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 244 294 IPR036638 GO:0046983
Acco01g1026 368 MobiDBLite consensus disorder prediction 23 60 - -
Acco01g1026 368 MobiDBLite consensus disorder prediction 198 244 - -
Acco01g1026 368 MobiDBLite consensus disorder prediction 230 244 - -
Acco01g1026 368 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983
Acco01g1026 368 FunFam transcription factor bHLH68 isoform X1 241 294 - -
Acco01g1026 368 Gene3D - 238 293 IPR036638 GO:0046983
Acco01g1026 368 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 351 - -
Acco01g1026 368 CDD bHLH_AtbHLH_like 239 291 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1026 Acco-ChrAcco01 13557582 13561770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1026 1 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.085 1.13e-65 210
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g1026 01 13557582 13561770 Acco01g1026 01 13557582 13561770 ECH