Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1016 ATGGGAGAAGGTGAGGGGGGAGATTTCCCTCCGAAGAATGTGTCATCGGATGCTACAGGAGCTGCGGTGCCGTCGGATGTTCCAGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACGGGCTATAGTGGCGGGGCCTTGCCTGAACACCAGCAGCCGCAACCGCAACCGCAGCCGCAGCCTCAGTTGCAGGCGGTGGCGCAAAGTCAGCCGCAGCCACGCCCTGTTACTACGCAACCGGTTGTTGTGATGCCTATGCCATCGCAGGTTCCTCATTCTTCAGCGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGGGCCAACTTTGATATGAAGGATGTTACTCCAAAGAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGTTATATTGTGAATGTTTTGCATCTGGAATATATTGTGACGGGTGCAACTGCGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCGAAAATTGCTAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGACGCCAGTGAAATTTTAATACTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCAATTGGATCTTCTGGTTATTTATCCCCTCCAGTGTCGAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGCCCAACAACCAAGGATACATCTGCTGGCAGGCTTGGCCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCCTGGTGCCCGTGTTGGAACTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTGGCAGACATCATTCAACCACAGCACTTGAAGGAGCTATGCTCCGTCCTGGTGCTAGTATCAGGACAGGCTGCAAAGACTTTTACAGATCAGAAAATGTTGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATTAGCCCAGATAATTCTAGTTCAGATGGCGCTGATGCCCCGAAAAGCAGGCCGATGTCTCCTGGAACCTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTCCATCTCCTAATGGTTCAATGGATCATGCTTGCAATACGTCTTTGCGTTCTCGTTACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGAATTGTTTTGACAAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGATTCAGAAGGAGGCAATAAACAATGGCAGTGGAAGTGCTGGTGCCGAAACGGCTCACCATCAGCAGATGGGAGCCACCAGTAATGGAGTTGTCAATGCTGTTGTGCCACCCATGGCCTCTAGTATGAACATGATTGCTTCAGAGGCTCCTGATAATCTTGTCCCTGAAAATGGGGATAGTAAGCCTAAGATTCAAAAGGAGATGTGA 1797 0.4597 MGEGEGGDFPPKNVSSDATGAAVPSDVPAKKLARQLDFTGYSGGALPEHQQPQPQPQPQPQLQAVAQSQPQPRPVTTQPVVVMPMPSQVPHSSARVGKPESPKSRSRANFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDASEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYLSPPVSKKRKGQELFFGPTTKDTSAGRLGQFQQANHIKSPAPSSSLSPVPGARVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFTDQKMLMEKNAEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFMTAPSPNGSMDHACNTSLRSRYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELEIQKEAINNGSGSAGAETAHHQQMGATSNGVVNAVVPPMASSMNMIASEAPDNLVPENGDSKPKIQKEM 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1016 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 120 155 IPR005172 -
Acco01g1016 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 206 240 IPR005172 -
Acco01g1016 598 ProSiteProfiles CRC domain profile. 119 243 IPR005172 -
Acco01g1016 598 Coils Coil 153 173 - -
Acco01g1016 598 MobiDBLite consensus disorder prediction 418 440 - -
Acco01g1016 598 MobiDBLite consensus disorder prediction 578 598 - -
Acco01g1016 598 MobiDBLite consensus disorder prediction 387 450 - -
Acco01g1016 598 SMART CXC_2 203 244 IPR033467 -
Acco01g1016 598 SMART CXC_2 118 158 IPR033467 -
Acco01g1016 598 MobiDBLite consensus disorder prediction 60 76 - -
Acco01g1016 598 MobiDBLite consensus disorder prediction 1 108 - -
Acco01g1016 598 PANTHER TESMIN/TSO1-RELATED 51 515 IPR028307 -
Acco01g1016 598 MobiDBLite consensus disorder prediction 390 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1016 Acco-ChrAcco01 13348558 13357983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1016 1 536 CPP Transcription Factor Family AT4G29000 57.345 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco01g1016 TCR 3.2e-12 No_clan