Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0999 ATGTCAGCAACACCGTCCCCCGGGGCTGCTCCGGCGCCCTCGTCGCCGCCGGCTCCGGCGACCAACAATACTGCTCCTCCGCCCAGCCTTTCAGCTCCTCCACCGTCCACCCCGGCCTCGCCGCCGCCAGCTACACCCTCTGCTCCACCGCCGGCGACTCCTTCGTCACCGCCTCCAGCGACCCCAACCACACCTTCTCCGAGCCCTCCTTCTCTTTCCCCTCCATCAACCTCACCACCACCGGAATCTTCGGCGTCGCCTCCTCCACCGTCCACTCCTAATACTCCGCCGAGTCGCAGCTCGCCGCCTCCTCCATCGGGCTCAAATTCGCCTTCGACTCCGAATCGAAGTCCGCCACCACCGTCGTCAAAATCGTCGCCTCCGCCGCCGCCGTCTTCGTCATCGTCCTCATCGAGTGGTATATCTACTGGGGTTGTTGTCGCCATTGCCGTTGGGGCTGTTGCGGTTCTTCTTGTTTTGAGTATTCTCTGCGTTTGCTGTAGGAAGAGAAAGAGAAGACGTGATGAGGAATACTATATGCCGCCGCCGGTACCGCCTCAGGGACCCAAAGTTGATCCATACGGTGGCCCACAGCGTCAATGGCAACACAATGCCCCCCCTCCGTCTTCAGATCATGTGGTTTCTGTAATGCCAAAGCCAGCACCCCCGCCAGCACCCCCGGTTGCATCACGGCCCACCCACCCGCCTGCTTATGCTCAACCTCCACCGCCCCCGCCACCTTTCATAAGCAGCAGTGGTGGGTCTGGTTCTAACTATTCGGGCGGTGATAACATTCTCCCACCTCCATCTCCAACCTATGCACTGGGCTTCTCAAAGAGTGCATTTACATATGAGGAGCTGGCCCGGGCAACGGATGGGTTCTCTGATGCTAACCTTCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGCATTCTTCCGAATGGAAAGGAAGTTGCCGTGAAGCAGCTTAAGGCTGGAAGTGGTCAGGGGGAGCGCGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAGTTTCATTTGCATGGAAAAGGTAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCAGCAAAGGGATTGGCGTATCTTCATGAGGATTGTCATCCTAAGATCATCCACCGCGATATCAAAGCTGCTAACATACTCCTTGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTTGCAAAGTTTACATCTGATCTTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTACCTGGCTCCGGAATATGCTTCTAGTGGGAAACTCTCAGAAAAATCAGATGTTTTCTCCTTTGGAGTCATGCTTCTGGAATTAATAACTGGACGCCGACCAGTTGATTCAAGCCATACATTTATGGAGGATAGTTTGGTAGACTGGGCAAGGCCTATGCTCACTCGTGCATTGGAAGAGGAAAATTTTGATTCCGTGGTTGATCCAAGACTCCAACATGATTATGACCCCAATGAGATGGCTCGTATGGCCGCATGTGCTGCAGCTTGCATACGACATTCAGCAAAACGCAGGCCAAAGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTATCCCTAGCGGATCTTAATGAAGGAATTAAACCAGGCCACAGCTCTGTCTACAGTTCTCGTGGAAGTTCGGATTATGACACAATTCAATACAATGAGGACATGAAAAAATTCAGGAAAATGGCATTCGGAGGAGGGACCAATGAGTATGGTGCCAGCAGTGAATACAGTGGGCCGCCTACTAGCGAGTATGGGTTGTATCCTTCTGGCTCGAGCAGTGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAGTTCATAA 2010 0.5194 MSATPSPGAAPAPSSPPAPATNNTAPPPSLSAPPPSTPASPPPATPSAPPPATPSSPPPATPTTPSPSPPSLSPPSTSPPPESSASPPPPSTPNTPPSRSSPPPPSGSNSPSTPNRSPPPPSSKSSPPPPPSSSSSSSSGISTGVVVAIAVGAVAVLLVLSILCVCCRKRKRRRDEEYYMPPPVPPQGPKVDPYGGPQRQWQHNAPPPSSDHVVSVMPKPAPPPAPPVASRPTHPPAYAQPPPPPPPFISSSGGSGSNYSGGDNILPPPSPTYALGFSKSAFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDLNTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGRRPVDSSHTFMEDSLVDWARPMLTRALEEENFDSVVDPRLQHDYDPNEMARMAACAAACIRHSAKRRPKMSQVVRALEGDVSLADLNEGIKPGHSSVYSSRGSSDYDTIQYNEDMKKFRKMAFGGGTNEYGASSEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMKNSQGFSGSS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0999 669 Gene3D Transferase(Phosphotransferase) domain 1 370 577 - -
Acco01g0999 669 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Acco01g0999 669 MobiDBLite consensus disorder prediction 217 250 - -
Acco01g0999 669 ProSiteProfiles Protein kinase domain profile. 294 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0999 669 PRINTS Proline rich extensin signature 58 79 - -
Acco01g0999 669 PRINTS Proline rich extensin signature 19 35 - -
Acco01g0999 669 PRINTS Proline rich extensin signature 5 17 - -
Acco01g0999 669 PRINTS Proline rich extensin signature 39 51 - -
Acco01g0999 669 MobiDBLite consensus disorder prediction 251 265 - -
Acco01g0999 669 MobiDBLite consensus disorder prediction 177 267 - -
Acco01g0999 669 MobiDBLite consensus disorder prediction 621 649 - -
Acco01g0999 669 Gene3D Phosphorylase Kinase; domain 1 272 369 - -
Acco01g0999 669 MobiDBLite consensus disorder prediction 621 669 - -
Acco01g0999 669 SMART serkin_6 294 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0999 669 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 152 635 IPR047117 -
Acco01g0999 669 Pfam Protein tyrosine and serine/threonine kinase 299 567 IPR001245 GO:0004672|GO:0006468
Acco01g0999 669 FunFam Proline-rich receptor-like protein kinase PERK1 370 578 - -
Acco01g0999 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Acco01g0999 669 MobiDBLite consensus disorder prediction 9 134 - -
Acco01g0999 669 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Acco01g0999 669 MobiDBLite consensus disorder prediction 1 140 - -
Acco01g0999 669 FunFam proline-rich receptor-like protein kinase PERK1 272 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0999 Acco-ChrAcco01 12946351 12949819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0999 55 652 Trihelix Transcription Factor Family AT1G70460 47.421 1.01e-169 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco01g0999 PK_Tyr_Ser-Thr 1.7e-47 CL0016