Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0946 ATGCTGAGTCAGATTCCACGCAAGCTTAACCCCGGACGAGATGAAGCCGTGTCACAAATTTATCACCTTCGCTTGAGCGCCATTTCTGTCAATCTCGTTCAGTATTGCTGTTCTTCTTGTCTGAAAATGCCTAGCCGATCAACCGGAACCATAACGCAAGACTGGGAACCGGTGGTTCTGCGCAAGAACAGACCTAAGGCCCAGGACCTGCGCAACCCGAAGGCCGTGAACCAGGCACTACGATCAGGAGCTGAGGTTCAGACGATCAAGAAGCACGACGCCGGTTCGAATAAGAGAAACGCTCCGGTCGTGTACGCGAGGAAGCTTGATGAAGAGACCGAGCCGGCGGCTCTGGAGAAGGTAAGAACAGAGGTGAGGATGGCCATACAGAAGGCTAGATTGGAGAAGAAGATGAGCCAGGCGGAACTTGCGAAGCAGATCAACGAGCGGCCACAGGTGGTTCAGGAGTACGAGAACGGGAAAGCGGTTCCGAATCAGGCCGTGCTGGCGAAGATGGAAAGAGTTCTCGGCGTGAAACTCCGAGGAAAGAATGGCTGCAAGTGA 564 0.539 MLSQIPRKLNPGRDEAVSQIYHLRLSAISVNLVQYCCSSCLKMPSRSTGTITQDWEPVVLRKNRPKAQDLRNPKAVNQALRSGAEVQTIKKHDAGSNKRNAPVVYARKLDEETEPAALEKVRTEVRMAIQKARLEKKMSQAELAKQINERPQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKNGCK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0946 187 Gene3D - 114 187 IPR010982 GO:0003677
Acco01g0946 187 Coils Coil 129 149 - -
Acco01g0946 187 ProSiteProfiles Cro/C1-type HTH domain profile. 129 183 IPR001387 -
Acco01g0946 187 SUPERFAMILY lambda repressor-like DNA-binding domains 124 180 IPR010982 GO:0003677
Acco01g0946 187 Pfam Helix-turn-helix 129 180 IPR001387 -
Acco01g0946 187 Pfam Multiprotein bridging factor 1 53 121 IPR013729 -
Acco01g0946 187 CDD HTH_XRE 128 180 IPR001387 -
Acco01g0946 187 SMART mbf_short4 128 183 IPR001387 -
Acco01g0946 187 FunFam Multiprotein bridging factor 1 113 185 - -
Acco01g0946 187 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 53 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0946 Acco-ChrAcco01 11933662 11934402 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Acco01g0946 MBF1 1.7e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0946 01 11933662 11934402 Acco01g0946 01 11933662 11934402 ECH