Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0943 ATGGACAATATGGTGGAAGATGATGCCACGTACCCTCGAAAGCCCTACGTTTCGAACCGTCCTAACTATTCCCATCGCCAACAGCATTTGGTTCGCTCCGTCCCGTATCGTCGCCCAGTGATCAGTCGATACGATGGGGACGATGAAGAAATGGATGATTATGACGTAGGGAATGACCTGGAGGACGACGATGGTGATGGGGAGAATGGTTACGCTATGAATGTTGATAGCGATGACGAGTTTGATAGAAACTCGAAGAAAAGGAAATTGCGGAATCCGTCTGCTTCAAACTTTGAGTTGGCACCTCATGGGAAGTTTTCACACGGGAATCGAAGCCCATCAGATGAATGGACAGAGCATGCGACGTTTGTTCTGTTAGAGGTTTGGGGGGACAAATTTCTTCAACTTGGGAGAAAGAGCTTGAGGTCTGAGGATTGGCATGACGTGGCCGAGAAGTTTTCGGAGGAGGTGAAGATGGAGAGGACCGTGGCACAGTGTAGGAACATGTTGGATAAACTGAAAAGAAGGTACAAGAAGGAGAAAGCGAAAATGGATGAAATGGGGTTGAATTCTAGTAAATGGGCTTGTTTTAAGAAGATGGATATGCTAATGGCTTCATCAGCAAGGCAAGAACATGGACTTTCCTGTGGAATGGATTCTGGGGAGTATGTTTTTATGAATACAAGGGTTTATTTAGATCGCTCAAATGGTTTGGATGAGATGAGAGATAGCCCTGGGGAGTCAGAGACGTCTGAAGACGACTCAGATGGGCTTCGAAGGACGAGGATTGTAGACAATGATGAGGGGGAAGAGTCTTCCTTTAGGGAATTGGCGGATTCTATTCAGAAGTTTGGTAAAATATATGAGAAAATTGAGAATCGTAAGAGGCGGCAGATGATGGAATTGGAGAAGATGAGATTGGATTTTAATAGGGACTTAGAGCTGCAGAAGAAGCAGATTTTGGAAAAAGCCCAGGCTGAAATTGCAAGCTTGCAAGAAGGAGATGAGGAGGATTCCGACACGTCCACAGAGAATGTCAGTGAATGA 1047 0.4546 MDNMVEDDATYPRKPYVSNRPNYSHRQQHLVRSVPYRRPVISRYDGDDEEMDDYDVGNDLEDDDGDGENGYAMNVDSDDEFDRNSKKRKLRNPSASNFELAPHGKFSHGNRSPSDEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWHDVAEKFSEEVKMERTVAQCRNMLDKLKRRYKKEKAKMDEMGLNSSKWACFKKMDMLMASSARQEHGLSCGMDSGEYVFMNTRVYLDRSNGLDEMRDSPGESETSEDDSDGLRRTRIVDNDEGEESSFRELADSIQKFGKIYEKIENRKRRQMMELEKMRLDFNRDLELQKKQILEKAQAEIASLQEGDEEDSDTSTENVSE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0943 348 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 92 335 IPR044823 -
Acco01g0943 348 MobiDBLite consensus disorder prediction 326 348 - -
Acco01g0943 348 Coils Coil 288 308 - -
Acco01g0943 348 MobiDBLite consensus disorder prediction 46 75 - -
Acco01g0943 348 MobiDBLite consensus disorder prediction 76 93 - -
Acco01g0943 348 MobiDBLite consensus disorder prediction 1 113 - -
Acco01g0943 348 Gene3D - 117 179 - -
Acco01g0943 348 MobiDBLite consensus disorder prediction 236 275 - -
Acco01g0943 348 MobiDBLite consensus disorder prediction 252 275 - -
Acco01g0943 348 MobiDBLite consensus disorder prediction 331 348 - -
Acco01g0943 348 Coils Coil 156 190 - -
Acco01g0943 348 Pfam Myb/SANT-like DNA-binding domain 115 202 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0943 Acco-ChrAcco01 11895964 11897010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0943 268 333 Trihelix Transcription Factor Family AT3G14180 42.424 3.13e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco01g0943 Myb_DNA-bind_4 8e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0943 01 11895964 11897010 Acco01g0943 01 11895964 11897010 ECH