Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0940 ATGGATCCAAACACCAACAATTCCATGAGCCCCAAAGGCGGAATGGCCTCCGACACAGAAATCAACAGCCGGTATGGCGTGAACTTCTCGGCGCCGAGGGGGTTCATGACAAAACTAAAGTCGGCAGCGAAAGAGACGCTGTTCCCGGACGACCCTTTCCGGCAGTTCATGAACGGAGAGAGGCGGAGAGATAGAATTGTGAAAGGATTTCAGTACTTTGTCCCATTGTTCGAATGGCTTCCGAACTACAAGCTCCGGCTGTTCTGGTCGGATCTCGTCGCCGGCCTCACCATCGCCAGCCTCGCCATCCCTCAAGGCATTAGCTACGCTAAACTCGCCGAGATTCCTCCCGTCATTGGCCTCTATAGCAGTTTTGTGCCACCACTGATGTATGCGATATTCGGAAGTTCAAGGCACATGGCGGTGGGGACGATAGCGGCGGCGTCGCTGCTGTTATCCCAAACGGTGTCGAGCGTGGTGAAGCCGGAGGATGACCCTACGTTGTATGTGCACTTGATTTTCACCGCCACCTTCATCACCGGTGTATTTCAGGCCGCGCTAGGTATTCTAAGGCTGGGGATATTTGTGGATTTCTTTTCGCATTCGACGATAACAGGGTTCATGGGAGGGACAGCGGTAATTCTGTGTCTGCAACAACTGAAGGGCGTATTTGGAATGAAACATTTCACTAGTCACACTAGTCTCATCTCTGTGTTGAAGGCCATCATAGCCAATAGAAGTGAGATAAGATGGGAGACCACAATCATGGGCGTCATCTTCGTGGCTTTCTTGATGTTCACTAAGTATGTGAAAAAGAAAAATCAAAAGCTGTTTTGGGTAGCAGCAATAGCTCCAATAACAACAGTGATCGTTGGAGCTCTGATCACTTATGCTATTAAAGGCCAAAATCACGGAATTCAAATTGTGGGTCACCTAGATCGAGGCGTAAATCCTTTTTCCATCCACTTACTAAACTTTGATCCCAAATATTTGCCAGCTGTCCTAAAAGCTGGTATTATCACAGGCGTTTTGTCATTAGCGGAAGGTATAGCAATAGGAAGAAGCTTCGCTGTTGTCGAAAATACCCCTCACGATGGCAACAAGGAGATGGTCGCATTTGGTCTTATGAACCTTATGGGCTCCTTTACTTCATGCTACTTGACCAGTGGTCCATTTTCGAAGAGTGCAGTGAATTACAACGCAGGGGCAAAGACACAGATGTCAAACGCAGTGCAAGCGGTGTTAATGGCGATGACGCTCATATTTCTGGCTCCATTGTTTGGGCGGACTCCTCTGGTGGCTCTCTCAGCCATTATCATATCAGCTATGTTGCCTCTCATTGATTATGAAGAAGCCATTCATCTGTTCAAGGTCGACAAGTTTGACTTCCTCATTTGCATCTCTTGCTTCTTGGGCGTCACCTTCATCTCCATGGACGTCGGCCTCTTCTTCTCTATTGGACTAGGATTGTTGAGAGCACTGTTGTACGTGGCAAGACCAGCGGCATGCAAGCTTGGGAAGATGCCTAACTCGTCTGATCTGTATAGAGACGTTGAGCAGTATCCTGTTTCAACTGTATTCCCAGGTGTTCTCATCGTTCAACTCGGTTCTCCTATCTACTTCGCTAACTCTTCCTACATCAAAGAGAGGGTCAAGAGGTATATTCAAAGCGAGGAGAAATCCGGTAATATTATACAGCTGGTCATACTCGATTTATCAAGCGTGACTTCCATTGATGTAACTGCTATTGGAGGATTGTTAGAGCTACGTAAAATCCTGGACAAAAATGAAAAGCAGGTGTCAATAGTGAACCCAAGGAAGGAGGTGATGGAGAAGCTGATAATATCAAGGTTTGTAGAAGTGGTTGGCAAAGAGACCTTCTTTTTGAGTTTGGATGATGCTGTGGCCGCTTCTCAGTTTCGCATATCCAAGGCAGATCCTTGA 1944 0.4717 MDPNTNNSMSPKGGMASDTEINSRYGVNFSAPRGFMTKLKSAAKETLFPDDPFRQFMNGERRRDRIVKGFQYFVPLFEWLPNYKLRLFWSDLVAGLTIASLAIPQGISYAKLAEIPPVIGLYSSFVPPLMYAIFGSSRHMAVGTIAAASLLLSQTVSSVVKPEDDPTLYVHLIFTATFITGVFQAALGILRLGIFVDFFSHSTITGFMGGTAVILCLQQLKGVFGMKHFTSHTSLISVLKAIIANRSEIRWETTIMGVIFVAFLMFTKYVKKKNQKLFWVAAIAPITTVIVGALITYAIKGQNHGIQIVGHLDRGVNPFSIHLLNFDPKYLPAVLKAGIITGVLSLAEGIAIGRSFAVVENTPHDGNKEMVAFGLMNLMGSFTSCYLTSGPFSKSAVNYNAGAKTQMSNAVQAVLMAMTLIFLAPLFGRTPLVALSAIIISAMLPLIDYEEAIHLFKVDKFDFLICISCFLGVTFISMDVGLFFSIGLGLLRALLYVARPAACKLGKMPNSSDLYRDVEQYPVSTVFPGVLIVQLGSPIYFANSSYIKERVKRYIQSEEKSGNIIQLVILDLSSVTSIDVTAIGGLLELRKILDKNEKQVSIVNPRKEVMEKLIISRFVEVVGKETFFLSLDDAVAASQFRISKADP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0940 647 Pfam Sulfate permease family 88 467 IPR011547 GO:0016020
Acco01g0940 647 ProSiteProfiles STAS domain profile. 520 638 IPR002645 -
Acco01g0940 647 CDD STAS_SulP_like_sulfate_transporter 521 631 - -
Acco01g0940 647 Pfam STAS domain 522 634 IPR002645 -
Acco01g0940 647 Gene3D STAS domain 499 641 IPR036513 -
Acco01g0940 647 NCBIfam sulfate permease 75 634 IPR001902 GO:0016020|GO:0055085
Acco01g0940 647 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Acco01g0940 647 PANTHER SULFATE TRANSPORTER 37 638 IPR001902 GO:0016020|GO:0055085
Acco01g0940 647 SUPERFAMILY SpoIIaa-like 524 637 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0940 Acco-ChrAcco01 11833024 11840297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0940 5 647 Inorganic Solute Cotransporters AT5G19600 58.320 0.0 774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0940 01 11833024 11840297 Acco01g0940 01 11833024 11840297 ECH