Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0938 ATGAAGAAGAAGGTCTATTTCTCTCTTCTTCTCATTGCCTTCTTCTTAGGCGCAATCTCTATCTCTGCCGCCGCCGATGTCCCCATTGCCAGCCATGGAGCTCTCACTGATGCCGAGGTCATGTATATCAAGCAACGTCAACTTCTTTACTACAGAGACGAGTACGGAGATAGAGGCGAAGAAGTCACCGTTGATCATTCTCTAGTTTTTGAGAATAATCGCATTAGAGATGCTTATAAAGCTTTACTAGCTTGGAAGCAAGCCATTCTTTCCGATCCGCAGAATTGTACGCTCAATTGGGTTGGTGCCAATGTCTGTAACTATAGTAACGTTTTCTGTGCTCCGGCGTTGGACAACCCTAAGATTCGTACTGTTGCCGGCATTGATCTTAACCACTGCGACATTGCTGGGTACTTGCCGGAAGAGCTTGGACTACTCACGGATCTTGCTCTCCTCCACATCAACACGAACAGGTTCTGTGGCACTGTTCCTCACAAGTTTGATAGACTGAAGCTTTTGTTTGAACTGGATCTCAGTAACAACAGGTTCGCTGGGAAGTTCCCTACGGTGGTTCTTAGGCTTCCCACTCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAAGGGACAGTGCCTAGAGAGCTTTTTGACAAGGATCTGGACGCGATCTTTATAAACAACAATCGTTTTGTGTTCAATCTTCCTGACAATTTTGGGAACTCACCGGTGTCGGTCATTGTCGTCGCCAACAACAAGTTCCATGGCTGTCTCCCGGCGAGCTTGGGCAACATGACGAACCTGAACGAGATAATTCTATTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACAGTGTTCGATGTCAGCTTCAATCAGCTTTTGGGTCCCTTGCCAGACACCATTGGAGGCATGGTGAGTCTTGAACAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAGATTCCAGGGGGCATTTGTATGCTGCCAAATCTACAGAACTTTACATTTTCATATAACTTCTTTACTGGTGAGCCACCGTCGTGCCTCAGCTTGCCGTCGTTCGATGATCGGAGAAACTGCTTGCCGGCGAGGCCATTACAGCGCTCAGCGGCTCAATGCCAGGCTTTCTTATCCAAGCCTGTGGACTGTAACTCGTTTAAATGCAAGCCATTTGTCCCGTCGCTTCCTCCACCTCCTAATCCTTCCCCTCCGATTCCGGTACCTTCCCCACCACCCGTAGTCGTACCTTCACACTCTCCGCCTCCGCCTCCACCTCCAGCTCCGGTGTATTCGCCGCCACCTCCTCCGCCACCTCCACCTCCGCCGGTTTATTCACCACCACCACCTCCACCAGTCTACTCTCCACCCCCTCCTCCACCACCACCACCACCTCCACCAGTCTACTCTCCGCCTCCTCCTCCACCTTCACCTCCCCCACCGTCACCTCCTCCGCCAGTATATTCTCCACCCCCGCCACCACCGTCACCTCCCCCTCCTTCACCACCACCACCACCACCACCCCCTCCAGTCTATTCACCACCACCTCCACCTCCTTCTCCATCGCCACCACCACCGTCACCTCCACCTCCATCTCCTCCACCACCATCAGCCGCACCAACGCCACCATATTGTGTCCGTTCTCCGCCACCCCCGCCACCAAATTCACCCCCACCACCACCACCGTCTCCTGTATTTTACCCGCCACCAACTTACAGCTCGCCTCCACCTCCTCATCACTTCCCTCCACCACCTCCTCACTCTCCTCCACCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCTCCACCACCTCCTCCTCCAGTCCATTCTCCTCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCACCTTGTATAGAACCCCCTCCACCTCCACCACCTTGTGAAGAGCAGCCACCACCGCCACCACCTTCTCCCACACCTTATTTACCACCTCCATCCCCATCTCCCCCTCCACCACCAGCTCCTGTTCACTACAGTTCACCACCGCCCCCTGTTCAGTACAATTCGCCGCCGCCGCCAGCACCAGTTCATTACAGTTCTCCCCCACCGCCAGTATACCATTCTTCTCCACCACCATCACCTCCGCCCTGTGAAGAAACACCGCCTCCTTCACCCCCACCTCCACCAGTCACATACGAAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTAGTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2283 0.5318 MKKKVYFSLLLIAFFLGAISISAAADVPIASHGALTDAEVMYIKQRQLLYYRDEYGDRGEEVTVDHSLVFENNRIRDAYKALLAWKQAILSDPQNCTLNWVGANVCNYSNVFCAPALDNPKIRTVAGIDLNHCDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPTLKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFNLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGGICMLPNLQNFTFSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSAAQCQAFLSKPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSHSPPPPPPPAPVYSPPPPPPPPPPPVYSPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPPPPPPVYSPPPPPPSPSPPPPSPPPPSPPPPSAAPTPPYCVRSPPPPPPNSPPPPPPSPVFYPPPTYSSPPPPHHFPPPPPHSPPPPHSPPPPIYPYLSPPPPPPVHSPPPVHSPPPPSPPPCIEPPPPPPPCEEQPPPPPPSPTPYLPPPSPSPPPPPAPVHYSSPPPPVQYNSPPPPAPVHYSSPPPPVYHSSPPPSPPPCEETPPPSPPPPPVTYENPPPAPVYEGPLPPVVGVSYASPPPPPFY 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0938 760 PRINTS Proline rich extensin signature 400 421 - -
Acco01g0938 760 PRINTS Proline rich extensin signature 446 463 - -
Acco01g0938 760 PRINTS Proline rich extensin signature 429 445 - -
Acco01g0938 760 MobiDBLite consensus disorder prediction 443 760 - -
Acco01g0938 760 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 543 - -
Acco01g0938 760 FunFam Leucine-rich repeat extensin-like protein 5 241 380 - -
Acco01g0938 760 SUPERFAMILY L domain-like 79 362 - -
Acco01g0938 760 Gene3D Ribonuclease Inhibitor 78 240 IPR032675 -
Acco01g0938 760 Gene3D Ribonuclease Inhibitor 241 381 IPR032675 -
Acco01g0938 760 FunFam Leucine-rich repeat extensin-like protein 1 79 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0938 Acco-ChrAcco01 11796278 11798560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0938 27 431 Leucine-rich Repeat extension Gene Families AT3G24480 70.443 0.0 614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0938 01 11796278 11798560 Acco01g0938 01 11796278 11798560 ECH